DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beat-Ib and beat-IIa

DIOPT Version :10

Sequence 1:NP_523579.1 Gene:beat-Ib / 34939 FlyBaseID:FBgn0028645 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_524384.3 Gene:beat-IIa / 42086 FlyBaseID:FBgn0038498 Length:431 Species:Drosophila melanogaster


Alignment Length:275 Identity:101/275 - (36%)
Similarity:146/275 - (53%) Gaps:43/275 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRLFIITAIYIASLPGLTVGLRNVNVRI-PSAVKRGDNALLICNYDIENDTLYTVKWYRGRREFY 72
            |.|.::..:.:.|:..:...|||||:.| |.||:||.:.:|.|.||::...||:.|:|||:.|||
  Fly    48 RCLLLLLGVLLLSMELVECALRNVNLIIEPPAVRRGQHVVLRCMYDLDGAPLYSAKFYRGQLEFY 112

  Fly    73 RYTPKENPAWKIFTKTNEIDVETAQSNASHVLLRNVPTSISGKFACEVSADAPTFDTSIVAADME 137
            ||||.|.|..|:|.... |.|:.:.|||:.||||||...:||.|:|||:||||.|.|:.....|:
  Fly   113 RYTPGEFPNTKVFPFPG-IHVDVSSSNATQVLLRNVGFGLSGNFSCEVTADAPLFSTATAVDTMQ 176

  Fly   138 VVELPTQRPIITGIHSRYRLGDVINGNCSSDYSKPAANLTWWINDI---QVPPNYLRIYDIQRHV 199
            |||||.:||.:...|:||..|||:..|||:..|:|.|.||:.||::   .|...|:|..|     
  Fly   177 VVELPEKRPQVFTEHTRYEPGDVLRANCSTPPSRPRAELTFTINNMVITHVDTEYIRTID----- 236

  Fly   200 AEHLESAVLEIKFVVTVHHFIK-----------------------------SRLKLKCSARIHEI 235
              :|.:..:.:|..:...||..                             ..|.|:|||:|.::
  Fly   237 --NLIATRISLKMQLQGIHFSSVNPAIYNNVYGLNSVYGHGGPVYAPNSNPGGLLLRCSAQIGDL 299

  Fly   236 YAQESEKLIEEDRPR 250
            |.:..|  ||...|:
  Fly   300 YQEYKE--IELGTPQ 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IbNP_523579.1 Ig 144..>182 CDD:472250 17/37 (46%)
Ig strand B 161..165 CDD:409353 0/3 (0%)
Ig strand C 175..179 CDD:409353 2/3 (67%)
beat-IIaNP_524384.3 None

Return to query results.
Submit another query.