DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tep1 and Cpamd8

DIOPT Version :9

Sequence 1:NP_523578.1 Gene:Tep1 / 34937 FlyBaseID:FBgn0041183 Length:1354 Species:Drosophila melanogaster
Sequence 2:XP_038963368.1 Gene:Cpamd8 / 297572 RGDID:1566313 Length:1493 Species:Rattus norvegicus


Alignment Length:1541 Identity:388/1541 - (25%)
Similarity:662/1541 - (42%) Gaps:292/1541 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LHCVLLS--------NANGLYSVLAPKTLRSNSAYNVVVAIHNTTRTTEVSVSLTGPSLNSRKYV 67
            |..|||:        |.|..|.||.|..|.:::...:.:.:::...|..|:.||.. ...:||..
  Rat    11 LFSVLLALLPSASSFNGNSKYMVLVPSQLYTDTPEKICLHLYHLNETVTVTASLIS-QRGTRKLF 74

  Fly    68 D---VQSMSSKSVRFDIPKLTEGDYE----LKVMGSGGIEFQNSTKLSFAPDLNWLYIQSDKATY 125
            |   |.......:.|.||:|...:.|    :.:.|:.. :|.....:......:.:::|:||..|
  Rat    75 DELVVDKDLFHCLSFTIPRLPSSEEEESLDINIEGAKH-KFSKRRVVLVKNKESVVFVQTDKPVY 138

  Fly   126 KPGDKIQFRVLFLDKNTRP-------AVIDKPIKIEIRDGDQNLIKSWKDIKPAKGVYSGELQLS 183
            |||..::||::.:|||..|       |.|:.| ||       |.|..|:|||...|:......||
  Rat   139 KPGQSVKFRIVSMDKNLHPLNELFPLAYIEDP-KI-------NRIMQWQDIKTENGLKQLSFSLS 195

  Fly   184 DRPVLGNWTVTATVQDEGKVTNVLVVDKYVVPKFEVVVLTAKNVAASAGYIRATIKARYTFKKPV 248
            ..|:.|.:.:....|...|..:...|.::|:|:|.|.|.....::.....|..|..|.||:.|||
  Rat   196 AEPIQGPYKIVILKQSGVKEEHSFTVMEFVLPRFGVDVKVPNAISVYDEIISVTACATYTYGKPV 260

  Fly   249 KGHVVATI-----------EGSSTEQSLPIDG------EVNV-EFPISAT---AKRLLKITAIVT 292
            .|.|..::           :.:..|:...:|.      |||: ||.:...   .::...:.|.||
  Rat   261 PGRVKISLCHGNPSFRSQTKSACKEEDSELDNNGCSTQEVNITEFRLKENYLKVRQAFHVNATVT 325

  Fly   293 EELTDIKHNGTAYVTVHQHRHKLEDLFWPTHYRPGVSSEFKTVVRNLDGSPVMDSSKMVNFNVLC 357
            ||.|..:.:|:..:.|.:.|:|...|...:|:|.|:....|..:.|:.|.|:.:....:      
  Rat   326 EEGTGSEFSGSGRIEVKRTRNKFLFLKADSHFRHGIPFFVKVRLVNIKGDPIPNQQVFI------ 384

  Fly   358 CQVSKNFSASLQNSIATEHIMLPETCQSCLVTSTFDTAENIERYI-------------------- 402
                |...|...|:..|:        |..|...:.||: .|.|||                    
  Rat   385 ----KAQGAGFTNATTTD--------QHGLAKFSIDTS-GISRYILNIKVYHKEENSCIHSSCTA 436

  Fly   403 -------------YKLNKPLMIAINTK----------KPQLRKLLKINIISDTYLPYFIL--TVV 442
                         |.|:|. .|.::|:          ..|...:||..::.  .||..:.  .|:
  Rat   437 ERHAEAHHTAYAVYSLSKS-YIYLDTEAGVLPCNQSHTVQAHFILKGQVLG--VLPQIVFHYLVM 498

  Fly   443 ARGNIVLSLFQEMKEKKKSQE-------IEFEPTFALVPQATIFVHYII-DGVLMSDEKTVDIER 499
            |:|:| |.......:.:..:.       :|....|::||.|.:.::.|: ||.:::|.....:|:
  Rat   499 AQGSI-LQTGNHTHQVEPGESPVQGNFALEIPVEFSMVPMAKMLIYTILPDGEVIADSVKFQVEK 562

  Fly   500 DFENTIEI-LTTNEALPRDEVSLKVKTNPHSFVGLLGVDQSVLLLRSGNDLNRDLILN------- 556
            ...:.:.: .:.:::||..:..::|..:|.|..||..||||||||:...:|:..||.:       
  Rat   563 CLRHEVHLSFSPSQSLPASQTHMRVTASPQSLCGLRAVDQSVLLLKPEAELSPSLIYDLPGMQES 627

  Fly   557 ------------------------NLATYS---------------TDLVILTNANINIY------ 576
                                    ...|||               |.|..|||..:..:      
  Rat   628 KFIPRSHYPFEDEDGCVIYRPRVIGKLTYSVPYGREKDVFRYMRDTGLTALTNLKLRTFCFDYDM 692

  Fly   577 --------RSSGGCYTNPGYTNCTGSLIGRTMFKNEPTKNSGPV-PIVGSTRAQASLPPVRKLFP 632
                    ||| ..:.:.||.:...:.:.....|..|.|:..|. |::.:         :|..||
  Rat   693 VPLAVPAARSS-DLFNSDGYGSWRSARVKSLPPKKAPHKDPPPKDPVIET---------IRNYFP 747

  Fly   633 ETWLFSNITDVGANGEYIIKETVPDTLTSWVITGFSLSPQSGLAVTRNPSRIRVFQPFFITTNLP 697
            |||::..:| |.::|...::.|||||:|.|......||..:||.:: :.:.::.|||||:...:|
  Rat   748 ETWVWDLVT-VNSSGAAELEMTVPDTITEWKAGALCLSNDTGLGLS-SVATLQAFQPFFVELTMP 810

  Fly   698 YSVKRGEVIAIPVIVFNYLGMDVKAKVLMDNSDGQYEFIETTNKNVSQYLRGVRRKKTLWIPANT 762
            |||.|||...:...|.|||...:...|.::.|. .:..:...|...| |..|          ||.
  Rat   811 YSVIRGEAFTLKATVMNYLPTSLPMAVQLEASP-DFTAVPVGNDQDS-YCLG----------ANG 863

  Fly   763 GRGISFMIRPKKVGLTTLKITAISKYAGDRL-HQILKVEADGVQKYVNKAVLINVQRLNRR---- 822
            ....|:::.||.:|.....::|.::.:.:.. .::..|...|.:..|.|.:::..:.:.|.    
  Rat   864 RHTSSWLVTPKSLGNVNFSVSAEAQQSPEPCGSEVATVPETGRKDTVVKVLIVEPEGIKREHTFS 928

  Fly   823 -----SLAPPEKTIIIEKADNVIEGSETVEFEVCGTSQAPQLEHLDDLVHLPCGCGEQNMFNFVP 882
                 |.|...:|:.:.....|::.|....|.|.|...:..:::..:|:.:|.|||||||..|.|
  Rat   929 SLLCASDAELSETLSLLLPPTVVKDSARAHFSVMGDILSSAIKNTQNLIQMPYGCGEQNMVLFAP 993

  Fly   883 SILALSYLKAKNRQDQEIENKAKRYVETGYQIELNYKRNDGSFSAWGQHD--ALGSTWLTAYVIR 945
            ||..|.||....:..::|::||..|:..|||.|||||..|||:||:|.||  ..|:|||||:|::
  Rat   994 SIYVLKYLNETQQLTEKIKSKALGYLRAGYQRELNYKHKDGSYSAFGDHDGKGQGNTWLTAFVLK 1058

  Fly   946 SFHQAAKYIDIDKNVLVAGLDFLVSRQSTDGKFKELGMVIHNSH----GSPLALTSFVLLTFFEN 1006
            ||.||..:|.||::.:.....:|..:|...|.|:..|.:.:|:.    ...:.|::::.:...|:
  Rat  1059 SFSQAQAFIFIDESHITDAFTWLSHQQKDSGCFRSSGSLFNNAMKGGVDDEITLSAYITVALLES 1123

  Fly  1007 EEYMPKYKH-VIDRAVEFVVT---EVHQSNE---PYDLAIAALALSLARN---RNAYKVLDKLDK 1061
              ..|..:| |:.:|:..:.:   .:.|...   .|..|:.|.|.:||.|   ||  ::|..|||
  Rat  1124 --LPPDTEHPVVSKALSCLESSWENIEQGGNGSFVYTKALMAYAFALAGNQEKRN--EILKSLDK 1184

  Fly  1062 LATRRGDHKWWTGSDK------------CKSSEVETTSYVLLALLEHNISDEPKPI------VDW 1108
            .|.:..:...|....|            ..|:|||..:||:||.|....:..||.:      :.|
  Rat  1185 EAIKEDNSIHWERPQKPMKSARSLYKPQASSAEVEMNAYVILARLTAQSAPSPKDLALSMGTIKW 1249

  Fly  1109 LISKRNSNGGFVSSQDTVVGIMALTKY---ELQSHASTEAIDIE----FWHLNEDKKHVRVTKEN 1166
            |..::||.|||.|:|||||.:.||:||   .......|.::.::    |:      :..:|...|
  Rat  1250 LTKQQNSRGGFSSTQDTVVALDALSKYGAATFSKSQKTPSVTVQSSGSFF------QKFQVDNSN 1308

  Fly  1167 EFKVQTHQLPENTNEVKLLAKGQGRAQVQLTYRYNVATKEARPSFKL-TTTVK---KSHKGRLIL 1227
            ...:|...||:......:...|:|....|...|||:..::.:|:|.| ..||.   .:.||:...
  Rat  1309 RLLLQQVSLPDIPGNYTVSVSGEGCVYAQTMLRYNLPLEKQQPAFALKVQTVPLTCNNPKGQNSF 1373

  Fly  1228 GICGTYTPIAASERNKTTNMALMQVQLPSGYVCDIEP-FADIEAISDVKRVETKNEDTEVHIYFE 1291
            .|.   ..|:.:.....:||.:..|::.||:: .::| ...:|.:..|.|.|....:  |.:|.:
  Rat  1374 QIS---LEISYTGSRPASNMVIADVKMLSGFI-PLKPTVKKLERLEHVSRTEVTTNN--VLLYLD 1432

  Fly  1292 KLSPGDRKCLTLEAIYTH--AVANLKPSWVRLYDYYATERSATEFY 1335
            :::   .:.|:...|...  .|.||:|:.|::||||.|:..|...|
  Rat  1433 QVT---NQTLSFSFIIQQDIPVKNLQPAIVKVYDYYETDEVAFAEY 1475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tep1NP_523578.1 A2M_N 116..201 CDD:280081 30/91 (33%)
A2M_N_2 411..542 CDD:285005 34/151 (23%)
A2M 634..726 CDD:278630 33/91 (36%)
A2M_2 859..1135 CDD:239227 105/309 (34%)
A2M_comp 910..1135 CDD:284982 85/258 (33%)
A2M_recep 1245..1335 CDD:284981 25/92 (27%)
Cpamd8XP_038963368.1 A2M_N 129..221 CDD:396416 31/99 (31%)
MG3 223..309 CDD:407663 22/85 (26%)
MG4 348..443 CDD:407661 20/113 (18%)
A2M_N_2 457..607 CDD:400170 35/152 (23%)
A2M 749..839 CDD:395153 33/91 (36%)
A2M_2 969..1276 CDD:239227 105/310 (34%)
A2M_recep 1388..1475 CDD:400149 25/92 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177369at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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