DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7653 and APE2

DIOPT Version :9

Sequence 1:NP_001356886.1 Gene:CG7653 / 34935 FlyBaseID:FBgn0028935 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_012765.3 Gene:APE2 / 853699 SGDID:S000001640 Length:952 Species:Saccharomyces cerevisiae


Alignment Length:696 Identity:171/696 - (24%)
Similarity:297/696 - (42%) Gaps:100/696 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CSAKTQLYDE-PR---LPAKVKPFHYDIRLLTHLESSANHSYTGIVKISIHAQK-TTNQVVLHVG 91
            |...:||.:: |.   ||..|.|.|||   ||.........:.|.|||.:.... ..:.|.|:..
Yeast    86 CQKTSQLLNKTPNREILPDNVVPLHYD---LTVEPDFKTFKFEGSVKIELKINNPAIDTVTLNTV 147

  Fly    92 RVSIESKKITLFGETSNYRLRSVRFNNDRKYMVVTF-----NQSLLMGKSYVLSVEFGRPMTMDQ 151
            ...|.|.||   |:.::..:.|     :.:..|.||     ..|...|.:: |.::| ..:..|.
Yeast   148 DTDIHSAKI---GDVTSSEIIS-----EEEQQVTTFAFPKGTMSSFKGNAF-LDIKF-TGILNDN 202

  Fly   152 RDGYFIRHYINWKTSEKIWYSVSHFNRNWIRNTMPSFDEPSLKATFNVTMGHHKRFQSYGNMKVQ 216
            ..|::...|.:..|.|..:.:.:.......|...|.||||:|||:|.:|:..........||.|:
Yeast   203 MAGFYRAKYEDKLTGETKYMATTQMEPTDARRAFPCFDEPNLKASFAITLVSDPSLTHLSNMDVK 267

  Fly   217 AVLPNREIQD-YVWSVHEVTPTIPTHLLAFSVNNFNCRYSQAASLS-PVRFRTCAQSADVRATSF 279
                |..::| ...::...||.:.|:|:||.|...  :|.::.:.. ||  |..|...:.:...|
Yeast   268 ----NEYVKDGKKVTLFNTTPKMSTYLVAFIVAEL--KYVESKNFRIPV--RVYATPGNEKHGQF 324

  Fly   280 AAQMAPQILEFLDRVLQVALPLEKIDQLVVDDFPTEAMENFGLVVYRSKHLLLREDGPMSKEKLQ 344
            ||.:..:.|.|.::...:..||.|:|.:.|.:|...||||:|||.||...|||.:|........:
Yeast   325 AADLTAKTLAFFEKTFGIQYPLPKMDNVAVHEFSAGAMENWGLVTYRVVDLLLDKDNSTLDRIQR 389

  Fly   345 TLELIAHEMAHMWFDNLLGMDSYSDLWLTEGLAGYFKSLAVDHLQSKMGRRILLRYRESSMMYES 409
            ..|::.||:||.||.||:.||.:..|||.||.|.:....:.:..|.:.  ::..:|...::.:..
Yeast   390 VAEVVQHELAHQWFGNLVTMDWWEGLWLNEGFATWMSWYSCNEFQPEW--KVWEQYVTDTLQHAL 452

  Fly   410 QVGGISL-----VPLSSNASLNA--ETQLYQKATSLTSMLIGFLGNETFYDGLQRHMWQNSFGSS 467
            .:..:..     ||:.....:|.  :...|.|..||..|:..:||.|||..|:.:::.:..:|::
Yeast   453 SLDSLRSSHPIEVPVKKADEINQIFDAISYSKGASLLRMISKWLGEETFIKGVSQYLNKFKYGNA 517

  Fly   468 TPDLFWRSLQLASEREATFDKTWDVKSIMDTWTMQSGYPLVTVIRNGS-EVFLKQGHALNRS--- 528
            ..:..|.:|..||.:        ||:|:|:.||.:.|:|:::|..:|: ::..:|...|:.:   
Yeast   518 KTEDLWDALADASGK--------DVRSVMNIWTKKVGFPVISVSEDGNGKITFRQNRYLSTADVK 574

  Fly   529 ---SSHLWWIPLTYLIEGGSLSKNLKPKAWLSPNSHGIKLNDIVPRNQWILLNLQAVGYYRVNYD 590
               ...::.:.|....:.|     :.....||..|..|:|.|    ..:..:|.:..|.|..:|.
Yeast   575 PDEDKTIYPVFLALKTKNG-----VDSSVVLSERSKTIELED----PTFFKVNSEQSGIYITSYT 630

  Fly   591 ELTWQLLATTLFNDFRSINVLNRAQIVSDVLFL-----------------WNQD--LLAWSTALN 636
            :..|..|....  |..|:.  :|..:|:||..|                 ||.:  .:.|...:|
Yeast   631 DERWAKLGQQA--DLLSVE--DRVGLVADVKTLSASGYTSTTNFLNLVSKWNNEKSFVVWDQIIN 691

  Fly   637 VLKYIIDEDEYEP----------LMAFVVGWTNGF-WGISTESSFN 671
            .:..:.....:||          ....:.|.|:.. |...:..||:
Yeast   692 SISSMKSTWLFEPKETQDALDNFTKQLISGMTHHLGWEFKSSDSFS 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7653NP_001356886.1 M1_APN-Q_like 52..500 CDD:341064 123/462 (27%)
ERAP1_C 574..>652 CDD:338125 19/106 (18%)
dnaA 630..>701 CDD:234667 9/53 (17%)
APE2NP_012765.3 PepN 90..941 CDD:223385 170/692 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11533
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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