DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7653 and Rnpep

DIOPT Version :9

Sequence 1:NP_001356886.1 Gene:CG7653 / 34935 FlyBaseID:FBgn0028935 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_112359.2 Gene:Rnpep / 81761 RGDID:621137 Length:650 Species:Rattus norvegicus


Alignment Length:487 Identity:93/487 - (19%)
Similarity:162/487 - (33%) Gaps:170/487 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 RNTMPSFDEPSLKATFNVTMGHHKRFQSYGNMKVQAVL---------PNREIQDYVWSVHEVTPT 237
            |...|.||.|::|.|::..:.....|        .||:         ||:       ...::...
  Rat   176 RAFFPCFDTPAVKCTYSALVEVPDGF--------TAVMSASTWERRGPNK-------FFFQMNQP 225

  Fly   238 IPTHLLAFSVNNFNCRYSQAASLSPVRFRTCAQSADVRATSFAAQMAPQILEFLDRVLQVALPL- 301
            ||::|:|.::.:.     .:|.:.| |.|..|:...:.|..  .:....|.|||....::..|. 
  Rat   226 IPSYLIALAIGDL-----ASAEVGP-RSRVWAEPCLIEAAK--EEYNGVIEEFLATGEKLFGPYV 282

  Fly   302 -EKIDQLVV-DDFPTEAMENFGLVVYRSKHLLLREDGPMSKEKLQTLELIAHEMAHMWFDNLLGM 364
             .:.|.|.: ..||...|||..|.....  .||..|..::       ::|.||::|.||.||:..
  Rat   283 WGRYDLLFMPPSFPFGGMENPCLTFVTP--CLLAGDRSLA-------DVIIHEISHSWFGNLVTN 338

  Fly   365 DSYSDLWLTEGLAGYFK--------SLAVDHLQSKMGRRILLRYRESSMMYESQVGG-------- 413
            .::.:.||.||...|.:        ..|...|::..||.:|.::.:        |.|        
  Rat   339 ANWGEFWLNEGFTMYAQRRISTILFGAAYTCLEAATGRALLRQHMD--------VSGEENPLNKL 395

  Fly   414 -ISLVPLSSNASLNAETQLYQKATSLTSMLIGFLGNETFYD------------------------ 453
             :.:.|.........||. |:|.....|.|...:|::..:|                        
  Rat   396 RVKIEPGVDPDDTYNETP-YEKGYCFVSYLAHLVGDQEQFDKFLKAYVDEFKFQSILAEDFLEFY 459

  Fly   454 ----------------GLQRHMWQNSFG--------------------------SSTPDL----- 471
                            |.:.:.|.|:.|                          :|.||:     
  Rat   460 LEYFPELKKKGVDSIPGFEFNRWLNTPGWPPYLPDLSPGDSLMKPAEELAELWAASEPDMQAIEA 524

  Fly   472 ----FWRSLQLASEREATFDKT----WDVKSIMDTWTMQSGYPLVTVIRNG------SEVFLKQG 522
                .|::.||....:....|:    .:||.:.:|      ||.::..:|.      .::.||..
  Rat   525 VAISTWKTYQLVYFLDKILQKSPLPPGNVKKLGET------YPKISNAQNAELRLRWGQIILKND 583

  Fly   523 HA---------LNRSSSHLWWIPLTYLIEGGS 545
            |.         |.......:.:||.:.:.|||
  Rat   584 HQEEFWKVKDFLQSQGKQKYTLPLYHAMMGGS 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7653NP_001356886.1 M1_APN-Q_like 52..500 CDD:341064 81/425 (19%)
ERAP1_C 574..>652 CDD:338125
dnaA 630..>701 CDD:234667
RnpepNP_112359.2 M1_LTA4H 24..484 CDD:341062 69/348 (20%)
Substrate binding. /evidence=ECO:0000250 298..302 1/3 (33%)
Leuk-A4-hydro_C 530..645 CDD:401171 19/92 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349326
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.