DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tektin-A and Tekt4

DIOPT Version :10

Sequence 1:NP_523577.1 Gene:Tektin-A / 34934 FlyBaseID:FBgn0028902 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001013987.1 Gene:Tekt4 / 302991 RGDID:1308075 Length:447 Species:Rattus norvegicus


Alignment Length:466 Identity:143/466 - (30%)
Similarity:234/466 - (50%) Gaps:25/466 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 EVQFARSMDPEADDLRNPPCYLPQQGDELPHKDQLMPMGPIGPWASGKVDWSPMAGITGTRPVVD 180
            ||...:...|::.|:    |.|||:..|:...        .|.:.|        ||:     ...
  Rat     5 EVLLTKEPAPQSIDV----CELPQKKYEVACN--------TGAYTS--------AGL-----ATA 44

  Fly   181 RYSITRYSPNEWRTRNHETVQVVNASLGRADKNRFSSTTEFLRLSALVDKSQKETTDKLRIRSQL 245
            .:...:|..:||...::.......|....:::.|..|.........|..::|.::|.::..|.:.
  Rat    45 GFRTAKYLMDEWFQNSYARYHQAFADRDYSERQRHESKQLAAETGELAYRTQLDSTRRVGERLED 109

  Fly   246 IGKWKNTLENAIKAMADEISTMEVERIKLRKSMVVLGVPESIAKECIEKRATRPDTELVRDQVEE 310
            :..||:.|:..|..::.|...|..::::|::::..|.||.|||.:.::.|..|...:||||.||.
  Rat   110 MHCWKSELQREIDELSSETDQMMAQKLRLQRALDALSVPFSIATDNLQCRERRQHPDLVRDYVEV 174

  Fly   311 ELVNELALIAEIRRLLMKTLDDFNSQQVENRTARQRLEYDWSDKKESYEIDTINTGLNNCSRTIM 375
            ||:.|..||..|:.||.:|:.....|...||..::..|.:||||.|.|.||.......|.|..:.
  Rat   175 ELLKETELIRNIQELLKRTMGQAVGQIRLNREHKENCEINWSDKVEVYNIDDTCARYTNESTQVQ 239

  Fly   376 FRPGAVRQPPEQASEKYWEHFSMETLDECEKCRLKSVALRNTLNSTLMNAARDIRTQADVVEKAL 440
            |.|.:.:.....::.:.|..|:.:.|...|:.||.||.||..::..|.:.|.|:|.|.|.|..|.
  Rat   240 FYPHSSKFEESASTPETWGKFTQDVLLRAERERLASVNLRKLIDCILRDTAEDLRLQCDAVNLAF 304

  Fly   441 TSRINCTQEAVQRFENDLKNILQGTADVENRIEQMKRRINSFDSSMKVAQTRMDNRSYRPNVENC 505
            ::|.....:|.|:.:..|..||....|.|::|..:|:.|...::.::|||||:..||:|||||.|
  Rat   305 SNRCEELNDARQKLQYHLLKILSEITDQEHQIAALKQAIKDKEAPLRVAQTRLYQRSHRPNVELC 369

  Fly   506 RDLAQQELIDGVHTIQSSVSALLHELEEAERVKTDLVNSRARLEREIMLKRRSLFIDRERCMLMR 570
            ||.||..|:..|..:..|:..|..:|::||:...:|.:||..||::|.:|..||||||::||..|
  Rat   370 RDNAQFRLMSEVEELNMSLKVLKEKLQDAEQALRNLEDSRMSLEKDIAVKTNSLFIDRQKCMTHR 434

  Fly   571 SYYPSANTLSG 581
            :.|||...|:|
  Rat   435 NRYPSVLQLAG 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tektin-ANP_523577.1 Tektin 192..574 CDD:460827 123/381 (32%)
Tekt4NP_001013987.1 Tektin 56..438 CDD:460827 123/381 (32%)

Return to query results.
Submit another query.