DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18109 and Tubgcp3

DIOPT Version :9

Sequence 1:NP_723933.1 Gene:CG18109 / 34931 FlyBaseID:FBgn0028901 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_001100793.2 Gene:Tubgcp3 / 306599 RGDID:1305726 Length:902 Species:Rattus norvegicus


Alignment Length:919 Identity:190/919 - (20%)
Similarity:341/919 - (37%) Gaps:223/919 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1113 SELSESSERESLSRNSNQILYLCKSCNAMLNYSEEVNKYFAGDFCINKKKFKVSDRNDLSNLERK 1177
            |||......:.:.:|...||||      :||.||:.          .|:..||:....|  ..:.
  Rat    75 SELHRKLHSQGVLKNKWSILYL------LLNLSEDP----------RKQASKVTSYASL--FAQA 121

  Fly  1178 FRQKWHHQRYVIAAPRAI-----IKSFKSNPAYGWS--------------PDDPNAPDFYEQLDQ 1223
            ..:..|...|..|.|:.:     .:|.:|:.:.|.|              |..|..|        
  Rat   122 LPRDAHSTPYYCARPQTLPLNYQDRSTQSSGSLGSSGISSIGMCGLSGPTPVQPFLP-------- 178

  Fly  1224 FFEVTGQKKYRAGC-DILFASIQLRLSQVLK-RIVRHAPKNTSFPDLITIVGVAQLEQLLTRKER 1286
                 ||.....|. |.|...:..||:..|. ......|.:.:||:        .|.:.|||..|
  Rat   179 -----GQSHQAPGVGDGLRQQLGPRLAWTLTGNQPSQTPTSKAFPN--------ALSRNLTRSRR 230

  Fly  1287 AAYESMRWQSRDKGDQDLSAESLFTDALHGMMGYGSPHLKLSSLTG------------------- 1332
                    :....|..:::..:|..|.|:...|....::|:||...                   
  Rat   231 --------EGDPGGTSEVTEAALVRDILYVFQGIDGKNIKMSSTENCYKVEAKANLSKSLRDTAV 287

  Fly  1333 RL--------QLRSPHHQESISESYLLLALGHFGYFYRELKEHLARLAEQGDTALALRKCLQKYL 1389
            ||        ::|....|.|:..|:.|:........::||||:...|:       .|...||   
  Rat   288 RLAELGWLHNKIRKYADQRSLDRSFGLVGQSFCAALHQELKEYYRLLS-------VLHSQLQ--- 342

  Fly  1390 LNLHQFYDVQKRNPSSLLSLYRRTRDFQRNFEWLLEVFNNVQKAK----SIVVYLYKESSRRTG- 1449
            |...|..:|...:..:|..|...|.|.:...:.|..:.::.|..|    :..|:.|    .:|| 
  Rat   343 LEDDQGVNVGLESSLTLRRLLVWTYDPKIRLKTLAALVDHCQGRKGGELASAVHAY----TKTGD 403

  Fly  1450 -YQRNLLLKWLRLVIQPLIYNLHIWLLNGRLPSTDHDMFVIEQTKYSKVDEFWEKRYRITESF-- 1511
             |.::|:...|.||..|::..|:.|:.:|.|..|.|:.||...... |.|..|..:|.:.:|.  
  Rat   404 PYMKSLVQHILSLVSHPVLSFLYRWIYDGELEDTYHEFFVASDPTV-KTDRLWHDKYTLRKSMIP 467

  Fly  1512 SGIFDPQLSEILISVGKTMEY----------SEKYLAINFESCVPRKEVRCMLLETFDKFLRHGD 1566
            |.|...|..::|: :||::.:          :.|.:|:...:..||                  |
  Rat   468 SFITMDQSRKVLL-IGKSINFLHQVCHDQTPTTKMIAVTKSAESPR------------------D 513

  Fly  1567 QEPLYNFVRN--------LHLEISSKVLKYLRKTKINPEYLFSGLHKYIMLTDLNFIMEFINALE 1623
            ...|:..:.|        .:.|.|..:|..|.:.....|:: ..:.:|::|...:||...::.|:
  Rat   514 AADLFTDLENAFQGKIDAAYFETSKYLLDVLNRKYSLLEHM-QAMRRYLLLGQGDFIRHLMDLLK 577

  Fly  1624 SVLGEPESSFNIQLFNEMKNKMLHKSVR--DIYIDKSE------------SEGSRCWSKLILRWK 1674
            ..|..|.::    |:......:|..:||  :...|..|            |.|...|....|.:.
  Rat   578 PELVRPATT----LYQHNLTGILETAVRATNAQFDSPEILKRLDVRLLEVSPGDTGWDVFSLDYH 638

  Fly  1675 MPTHWRALLGEDSKA-YEVIFKAMWRFHYVYYVLNERVHRQQIRFQNHIECTYFEGLNDTLKCFS 1738
            :......:...:..: |..:|..:||...:.|:|.:      || :.|: |.  ..|...:..||
  Rat   639 VDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTD------IR-KGHM-CN--AKLLRNMPEFS 693

  Fly  1739 KLTNACLRLMNVL------MEYFLDY-LLEPAFARLLWYCRNAITVDELLVANRKYLKTIILGSL 1796
            .:.:.|..|.:.:      |:|::.: :||.::..|....:.|..:|.::.|:..:|.||....|
  Rat   694 GVLHQCHILASEMVHFIHQMQYYITFEVLECSWDELWNRVQQAQDLDHIIAAHEAFLDTITSRCL 758

  Fly  1797 QTKNLRKYLERL---YDLILQLDNKHWKFLRLCQTSVEYVIRVRKEKPQSIFSTYYRERMLQFRW 1858
            ...|.|..|.:|   :|.|::|.|......|.....::..::..::|         ::|..:.:|
  Rat   759 LDSNSRVLLNQLRAVFDQIIELQNAQDTMYRAALEELQRRLQFEEKK---------KQRETEGQW 814

  Fly  1859 ------------TCQNYSDVINEMKDQFDL-------AMISFLLCLHLADDDSLRSLAKRLDPEH 1904
                        ..:.:.|.|.:|..|..:       .:..||:.|..:.|:||:.|:.|||...
  Rat   815 GVTAAEEEEENKRIREFQDSIPKMCSQLRILTHFYQGVVQQFLVLLTTSSDESLQFLSFRLDFNE 879

  Fly  1905 YYMEKDNRL 1913
            :|..::.||
  Rat   880 HYKAREPRL 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18109NP_723933.1 Spc97_Spc98 1312..1796 CDD:282045 115/558 (21%)
Tubgcp3NP_001100793.2 GCP_N_terminal 246..547 CDD:407574 71/334 (21%)
Spc97_Spc98 550..881 CDD:398000 71/354 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343338
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2000
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19302
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.840

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