DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18109 and tubgcp3

DIOPT Version :9

Sequence 1:NP_723933.1 Gene:CG18109 / 34931 FlyBaseID:FBgn0028901 Length:1931 Species:Drosophila melanogaster
Sequence 2:NP_001116269.1 Gene:tubgcp3 / 100101728 XenbaseID:XB-GENE-490983 Length:906 Species:Xenopus tropicalis


Alignment Length:1035 Identity:205/1035 - (19%)
Similarity:352/1035 - (34%) Gaps:325/1035 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1057 SQDFDYLTDDLSGESVVKV-----SPLKNVDRFI------SEWT-QKNPSDSILGKPYPKNLRYT 1109
            :|.|.|         .|:|     :|....|.|:      .|:. |:..:|..|           
 Frog    29 AQQFQY---------AVRVIGSNFAPTVERDEFLVAEKIKKEFVRQRREADGAL----------- 73

  Fly  1110 SETSELSESSERESLSRNSNQILYLCKSCNAMLNYSEEVNKYFAGDFCINKKKFKVSDRNDLSNL 1174
              .|||....:.:.:.:|...:|||      :|:.||:..|                ..|..|:.
 Frog    74 --FSELHRKLQSQGVLKNRWSVLYL------LLSLSEDPRK----------------QPNKTSSY 114

  Fly  1175 ERKFRQKW----HHQRYVIAAPRAIIKSFK-------SNPA------------------------ 1204
            ...|.|..    |...|..|.|:::..|::       .|.|                        
 Frog   115 AALFAQALPRDAHSTPYYYARPQSLQLSYQDRNVQCAQNAASMGSSGIGSIGMYALNGPTPQSII 179

  Fly  1205 YGWSPDDPNAPD-FYEQLDQFFEVT---GQKKYRAGCDILFASIQLRLSQVLKRIV-RHAPKNTS 1264
            .|.|...||..| ..:||......|   ||:          .|.|...::.|...| |:.|:   
 Frog   180 QGQSYQTPNMGDALRQQLGSRLAWTLAAGQQ----------PSQQSTTTKGLPNTVSRNVPR--- 231

  Fly  1265 FPDLITIVGVAQLEQLLTRKERAAYESMRWQSRDKGDQDLSAESLFTDALHGMMGYGSPHLK--- 1326
                             ||:|          ....|..:::..:|..|.|:...|.....:|   
 Frog   232 -----------------TRRE----------GDSSGSVEITETALVRDLLYVFQGIDGKFIKMCN 269

  Fly  1327 ----------------LSSLTGRL--------QLRSPHHQESISESYLLLALGHFGYFYRELKEH 1367
                            |..:|.:|        ::|....|.|:..::.|:........::||||:
 Frog   270 SENCYKVDGKVALSKSLKDITSKLAELGWLHNKIRKYTDQRSLDRAFGLVGQSFCAALHQELKEY 334

  Fly  1368 LARLAEQGDTALALRKCLQKYLLNLH---QFYDVQKRN--PSSLLSLYRR---TRDFQRNFEWLL 1424
                              .:.|..||   |..|.|..|  ..|.|:|.|.   |.|.:...:.|.
 Frog   335 ------------------YRLLSVLHSQLQVEDDQGVNLGMESNLTLRRLLVWTYDPKIRLKTLA 381

  Fly  1425 EVFNNVQKAK----SIVVYLYKESSRRTG--YQRNLLLKWLRLVIQPLIYNLHIWLLNGRLPSTD 1483
            .:.::.|..|    :..|:.|    .:||  |.|:|:...|.||..|::..|:.|:.:|.|..|.
 Frog   382 ALVDHCQGRKGGELASAVHAY----TKTGDPYMRSLVQHILGLVSHPILNFLYRWIYDGELEDTY 442

  Fly  1484 HDMFVIEQTKYSKVDEFWEKRYRITESFSGIFDPQLSEILISVGKTMEYSEKYL----AINFESC 1544
            |:.||...... |.|..|..:|.:.:|            :|....||:.|.|.|    :|||...
 Frog   443 HEFFVASDPMV-KTDRLWHDKYSLRKS------------MIPSFMTMDQSRKVLLIGKSINFLHQ 494

  Fly  1545 VPRKEVRCMLLETFDKFLRHG-------DQEPLYNFVRN--------LHLEISSKVLKYLRKTKI 1594
            |      |.......|.:..|       |...|:..:.|        .:.:.|..:|..|.|...
 Frog   495 V------CHDQTPATKTMAVGQSAESPKDAADLFTDLENAFQSKIDAAYFDTSKYLLDVLNKNYN 553

  Fly  1595 NPEYLFSGLHKYIMLTDLNFIMEFINALESVLGEPESSFNIQLFNEMKNKMLHKSVR--DIYIDK 1657
            ..|:: ..:.:|::|...:||...::.|:..|..|.::    |:......:|..:||  :...|.
 Frog   554 LLEHM-QAMRRYLLLGQGDFIRHLMDLLKPELVRPATT----LYQHNLTGILETAVRATNAQFDN 613

  Fly  1658 SE------------SEGSRCWSKLILRWKMPTHWRALLGEDSKA-YEVIFKAMWRFHYVYYVLNE 1709
            .|            |.|...|....|.:.:......:...:..: |..:|..:||...:.|:|.:
 Frog   614 PEILKRLDVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTD 678

  Fly  1710 RVHRQQIRFQNHIECTYFEGLNDTLKCFSKLTNACLRLMNVL----------------MEYFLDY 1758
                   .::.|:             |.:||..:...|..||                |:|::.:
 Frog   679 -------IWKGHM-------------CNAKLLKSMPELSGVLHQCHILASEMVHFIHQMQYYITF 723

  Fly  1759 -LLEPAFARLLWYCRNAITVDELLVANRKYLKTIILGSL---QTKNLRKYLERLYDLILQLDNKH 1819
             :||.::..|......|..:|.::.|:..:|.|||...|   :::.|...|..::|.|::..|..
 Frog   724 EVLECSWDELWNKVLQAQDLDHIIAAHDVFLDTIISRCLLDSESRALLNQLRAVFDQIIEFQNAQ 788

  Fly  1820 WKFLRLCQTSVEYVIRVRKEKPQSIFSTYYRERMLQFRW------------TCQNYSDVINEMKD 1872
            ....|.....::..::..:.|         :||..:.:|            ..|.:.:.|.:|:.
 Frog   789 DALYRAALEELQLRLQFEERK---------KERASEGQWGVTAAEEEEENKRVQEFQESIPKMRS 844

  Fly  1873 QFDL-------AMISFLLCLHLADDDSLRSLAKRLDPEHYYMEKDNRLDLVQYFEFRRKL 1925
            |..:       .:..||:.|..:.|:|||.|:.|||...:|..::.||.:......||.|
 Frog   845 QLRILTHFYQGIVEQFLVLLTTSTDESLRFLSFRLDFNEHYKAREPRLRVSLGTRGRRSL 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18109NP_723933.1 Spc97_Spc98 1312..1796 CDD:282045 118/575 (21%)
tubgcp3NP_001116269.1 GCP_N_terminal 250..550 CDD:375250 74/340 (22%)
Spc97_Spc98 554..885 CDD:367830 69/364 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004051
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19302
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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