DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ku80 and SEC14L1

DIOPT Version :9

Sequence 1:NP_609767.2 Gene:Ku80 / 34930 FlyBaseID:FBgn0041627 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001034662.3 Gene:SEC14L1 / 6397 HGNCID:10698 Length:719 Species:Homo sapiens


Alignment Length:426 Identity:76/426 - (17%)
Similarity:131/426 - (30%) Gaps:159/426 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 NVLPFGEPRLCSWQLLLEFFQFVNKTACEDGEWLNGLQAALEL-----QNVATTLRVARRRILLL 126
            |...||.| :.||..|:: .:.:|....    |..|::|.|.:     .|...||    .|:|:|
Human   381 NTKVFGRP-ISSWTCLVD-LEGLNMRHL----WRPGVKALLRIIEVVEANYPETL----GRLLIL 435

  Fly   127 FDFNDFPQDYEKFNEITDELLGENIELIVGTHN------IAYIDNAITSQPQAIFNFSRKCGPDE 185
            .....||..:...:...|:.......:..|...      :.|||..|.              ||.
Human   436 RAPRVFPVLWTLVSPFIDDNTRRKFLIYAGNDYQGPGGLLDYIDKEII--------------PDF 486

  Fly   186 LNNQKYALSLVPRCNATLCSFKEALHTVFKVTNRRPWVWNAKLNIGSKISISLQGIIAMKNQTPV 250
            |:.:         |   :|...|                      |..:..||.       :|..
Human   487 LSGE
---------C---MCEVPE----------------------GGLVPKSLY-------RTAE 510

  Fly   251 KL----VKVWAEKDEIVIRETRHYIKGTEITPLPENLITGYMLGGTPVPYDEAVLE--------- 302
            :|    :|:|.|    .|.::....||.     |..::...:...:.:.:|..|.:         
Human   511 ELENEDLKLWTE----TIYQSASVFKGA-----PHEILIQIVDASSVITWDFDVCKGDIVFNIYH 566

  Fly   303 -PKEPHPP-----GLHFFGFIKRN----------------AVPDEYFC--GESL----------- 332
             .:.|.||     |.|.......|                .|.....|  |||:           
Human   567 SKRSPQPPKKDSLGAHSITSPGGNNVQLIDKVWQLGRDYSMVESPLICKEGESVQGSHVTRWPGF 631

  Fly   333 YLLVHQKHNQSAAV-----KLDALVRAL-VSSDRAILCWKIYSTKFNRPQMVVLLPRLADDTHPA 391
            |:|..:.|:..|..     ::|.::.:| |||.:   |..:|.|:.           :..:....
Human   632 YILQWKFHSMPACAASSLPRVDDVLASLQVSSHK---CKVMYYTEV-----------IGSEDFRG 682

  Fly   392 TLYMLEVSYTSQHHFWDFPALRTTKTECSEEQLNAI 427
            ::..||.|::.      |..|....|..|:...:::
Human   683 SMTSLESSHSG------FSQLSAATTSSSQSHSSSM 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ku80NP_609767.2 Ku_N 7..213 CDD:281693 32/156 (21%)
KU80 221..524 CDD:238445 44/261 (17%)
Ku_PK_bind 562..663 CDD:285938
SEC14L1NP_001034662.3 PRELI 17..173 CDD:368069
CRAL_TRIO_N 256..301 CDD:215024
CRAL_TRIO 326..490 CDD:366224 29/132 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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