DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ku80 and CG10301

DIOPT Version :9

Sequence 1:NP_609767.2 Gene:Ku80 / 34930 FlyBaseID:FBgn0041627 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_651173.2 Gene:CG10301 / 42797 FlyBaseID:FBgn0039106 Length:306 Species:Drosophila melanogaster


Alignment Length:94 Identity:20/94 - (21%)
Similarity:39/94 - (41%) Gaps:27/94 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 WVWNAK---------LNIGSKIS---ISLQGIIAMKNQTPVKLVKVWAEKDEIVIRETRHYIKGT 274
            |::|..         :|:...|.   :.|..:::|:...|::::|...|..|.:.:|:       
  Fly   183 WLYNCSPLKVKEMYIINMPKDIQGTVMFLYNVLSMQVNYPIRVLKNSEELIEHIGKES------- 240

  Fly   275 EITPLPENL--ITGYMLGGTPVPYDEAVL 301
                |||..  ..|::  |..|.|.|.:|
  Fly   241 ----LPEEYGGTNGHL--GECVAYMEDLL 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ku80NP_609767.2 Ku_N 7..213 CDD:281693
KU80 221..524 CDD:238445 20/94 (21%)
Ku_PK_bind 562..663 CDD:285938
CG10301NP_651173.2 CRAL_TRIO_N 25..71 CDD:215024
CRAL_TRIO 114..248 CDD:279044 14/75 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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