DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ku80 and CG1902

DIOPT Version :9

Sequence 1:	NP_609767.2	Gene:	Ku80 / 34930	FlyBaseID:	FBgn0041627	Length:	699	Species:	Drosophila melanogaster
Sequence 2:	NP_610507.1	Gene:	CG1902 / 35993	FlyBaseID:	FBgn0033434	Length:	312	Species:	Drosophila melanogaster

Alignment Length:	153	Identity:	34/153 - (22%)
Similarity:	56/153 - (36%)	Gaps:	33/153 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   489 DKNFADVF-----WRVPDPLEEKSKRAAAIVKKLFPLRYSRAWQEKLLAKEQAENGVAVKSEPAE 548
            |..|...|     |.|    ||..||.      ||...|....:|.|..::..:..:.:......
  Fly    48 DDQFLVAFLRFCRWDV----EEAKKRV------LFYYTYKSKERELLKGRQVDDKLIELARSGIF 102

  Fly   549 KEIPLPSDGVGLIDPISDFRR---VLASVHTISNATERDARFQALAADTRVVIITLLQRRKQNIG 610
            ..:|.|   :|...|...:.|   :..|.|::|:.    .||.|..|:     |.:......||.
  Fly   103 ATLPKP---IGPGGPRIHYTRMGHIEPSKHSVSDI----FRFHAFRAE-----IEINTDDNWNIA 155

  Fly   611 QLGELITLYRQSCIDFNTFLEYD 633
            .:.|:|...:   |.::..|::|
  Fly   156 GVVEIIDFTK---IPYSLLLQFD 175

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ku80	NP_609767.2	Ku_N	7..213	CDD:281693
		KU80	221..524	CDD:238445	12/39 (31%)
		Ku_PK_bind	562..663	CDD:285938	17/75 (23%)
CG1902	NP_610507.1	CRAL_TRIO_N	28..69	CDD:215024	7/24 (29%)
CG1902	NP_610507.1	CRAL_TRIO	100..248	CDD:279044	20/91 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900