DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ku80 and CG31826

DIOPT Version :9

Sequence 1:NP_609767.2 Gene:Ku80 / 34930 FlyBaseID:FBgn0041627 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001260473.1 Gene:CG31826 / 326164 FlyBaseID:FBgn0051826 Length:268 Species:Drosophila melanogaster


Alignment Length:190 Identity:41/190 - (21%)
Similarity:68/190 - (35%) Gaps:61/190 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 RILLLF----DFNDFPQDYEKFNEITDELLGENIELI--VGTHNIAYI-DNAITSQPQAIFNFSR 179
            |:|::|    .|.|:|...:...|: |:|:.|::.|:  |..:.|..| |...|::     ||.|
  Fly   101 RVLVVFKTVDGFQDYPDYLQSLVEM-DDLIFESLLLLPRVQQNGITVICDLQGTNR-----NFLR 159

  Fly   180 KCGPDELNNQKYALSLVPRCNATLCSFKEALHTVFKVTNRRPWVWNAKLNIGSKISISLQGIIAM 244
            :..|                            ...||.|.:    |..|....:|...:|....|
  Fly   160 QFSP----------------------------AFMKVVNEK----NGVLPFSQRIVHIIQRGFLM 192

  Fly   245 KNQTPVKLVKVWAE-KDEIVIRETRHYIK-----GTEITP----------LPENLITGYM 288
            ...:.:.:..:..| |::|...:.||..|     |.|..|          |..|||..::
  Fly   193 HVTSTLFMPFMNKEFKEKIFTHDGRHLSKLREMVGYESLPAEYGGPATNVLDTNLIFNHL 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ku80NP_609767.2 Ku_N 7..213 CDD:281693 20/97 (21%)
KU80 221..524 CDD:238445 18/84 (21%)
Ku_PK_bind 562..663 CDD:285938
CG31826NP_001260473.1 CRAL_TRIO_N 17..61 CDD:215024
CRAL_TRIO 92..237 CDD:279044 37/173 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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