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Protein Alignment Ku80 and Rlbp1
DIOPT Version :9
Sequence 1: | NP_609767.2 |
Gene: | Ku80 / 34930 |
FlyBaseID: | FBgn0041627 |
Length: | 699 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099744.1 |
Gene: | Rlbp1 / 293049 |
RGDID: | 1309649 |
Length: | 317 |
Species: | Rattus norvegicus |
Alignment Length: | 190 |
Identity: | 38/190 - (20%) |
Similarity: | 67/190 - (35%) |
Gaps: | 71/190 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 498 RVPDPLEEKSKRAAAIVKKLFPLRYSRAWQEKLLAKEQAENGVAVKSEPAEKEIPLPSDGVGLID 562
:..|.|.|:.:.....|::| || |.:.||.:|..:....||
Rat 47 KAKDELNEREETRDEAVREL---------QE--LVQAQAASGEELAVAVAE-------------- 86
Fly 563 PISDFRRVLASVHTISNATERDARFQALAADTRVVIITLLQRRKQNIGQLGELITLYRQSCIDFN 627
||.| ||:.| ::..::.||.::|:..||:..| ::|.
Rat 87 ------RVQA----------RDSAF----------LLRFIRARKFDVGRAYELLKGY----VNFR 121
Fly 628 TFLEYDKFAEELKKIALAKNRSEFWQDVMVDK-QLGPLVLGEPTLDDELALKAYYTIENW 686
|:|.:..:.|...||.......:..|:..: :.|.:|: .:.||||
Rat 122 --LQYPELFDSLSMEALRCTIEAGYPGVLSSRDKYGRVVM-------------LFNIENW 166
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1471 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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