DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ku80 and SEC14L4

DIOPT Version :9

Sequence 1:NP_609767.2 Gene:Ku80 / 34930 FlyBaseID:FBgn0041627 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_016884276.1 Gene:SEC14L4 / 284904 HGNCID:20627 Length:465 Species:Homo sapiens


Alignment Length:498 Identity:90/498 - (18%)
Similarity:158/498 - (31%) Gaps:162/498 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 GCDTDEIKTEDASHPNVLPFGEPRLCSWQLLLEFFQFVNKTACEDGEWLNGLQAAL---ELQNVA 113
            ||.....::....||.....|    ..|.::.|                 ||.|.|   |:....
Human    25 GCPIFRWQSRSGQHPAWSSGG----VDWWMMWE-----------------GLGAGLVAPEVMRAP 68

  Fly   114 TTLRVA----RRRILLLFDFNDFPQDY--------EKFN-EITDELLGENIELIVGTHNIAYIDN 165
            .|:|.:    |..:..|........||        ..|: :.::::|..::|.    .....:||
Human    69 PTIRSSSAQFRENLQDLLPILPNADDYFLLRWLRARNFDLQKSEDMLRRHMEF----RKQQDLDN 129

  Fly   166 AITSQPQAI---FNFSRKCGPD------------ELNNQKYALSL----VPRCNATLCSFKEALH 211
            .:|.||..:   ::....||.|            .|:.:...||.    :.|....:|..  .||
Human   130 IVTWQPPEVIQLYDSGGLCGYDYEGCPVYFNIIGSLDPKGLLLSASKQDMIRKRIKVCEL--LLH 192

  Fly   212 TVFKVTNRRPWVWNAKLNIGSKISISLQGIIAMKNQTPVKLVKVWAEKDEIV-----IRETRH-- 269
            .....|.:          :|.||.::|. :..|:.   :.|..:|....|:.     |.|..:  
Human   193 ECELQTQK----------LGRKIEMALM-VFDMEG---LSLKHLWKPAVEVYQQFFSILEANYPE 243

  Fly   270 ------YIKGTEITPLPENLITGYM----------LGGT--------------PVPYDEAVLEPK 304
                  .|:..::.|:..||:..:|          ||..              ||.:...:.:| 
Human   244 TLKNLIVIRAPKLFPVAFNLVKSFMSEETRRKIVILGDNWKQELTKFISPDQLPVEFGGTMTDP- 307

  Fly   305 EPHPPGLHFFGFIKRNAVPDEYFCGESLYLLVHQKHNQSAAVKLDALVRALVSSDRAILCWKIYS 369
            :.:|..|....:  ...||..|:..|.:.|  ..:|.:|........|...:.....:|.|:..|
Human   308 DGNPKCLTKINY--GGEVPKSYYLCEQVRL--QYEHTRSVGRGSSLQVENEILFPGCVLRWQFAS 368

  Fly   370 ------------TKFNRPQ----MVVLLPRLADDTH-----------PATLYML--EVSYTSQHH 405
                        ||....|    |..:||....:.|           .|.:|:|  :.:|:..| 
Human   369 DGGDIGFGVFLKTKMGEQQSAREMTEVLPSQRYNAHMVPEDGSLTCLQAGVYVLRFDNTYSRMH- 432

  Fly   406 FWDFPALRTTKTECSEEQLNAIDQLIDSTDLECTLRDTQQPRP 448
                 |.:.:.|         ::.|:.....|.||:..:..||
Human   433 -----AKKLSYT---------VEVLLPDKASEETLQSLKAMRP 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ku80NP_609767.2 Ku_N 7..213 CDD:281693 36/195 (18%)
KU80 221..524 CDD:238445 53/294 (18%)
Ku_PK_bind 562..663 CDD:285938
SEC14L4XP_016884276.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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