DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3793 and LCMT2

DIOPT Version :9

Sequence 1:NP_001246038.1 Gene:CG3793 / 34928 FlyBaseID:FBgn0028507 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_055608.2 Gene:LCMT2 / 9836 HGNCID:17558 Length:686 Species:Homo sapiens


Alignment Length:304 Identity:113/304 - (37%)
Similarity:156/304 - (51%) Gaps:9/304 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AVIATNDDASDCKRCAVRLGYWKDDYIGYFVRNQERKAPEINRGYFARVKGVEMCVEKFLKKTSG 86
            ||..|||.::..||.....||.:|.:....|....|:||.|:|||:.|.:.|..||..||::...
Human    12 AVQNTNDSSALSKRSLAARGYVQDPFAALLVPGAARRAPLIHRGYYVRARAVRHCVRAFLEQIGA 76

  Fly    87 -----NCQIINLGCGFDTLYFRLRDTAHQVKNFI-ELDFPTVTARKCYTIKRNKALLARIHD-ED 144
                 ..||::||.|||:|||||:......:..: |:|||.|..||...|.....|.|.... |.
Human    77 PQAALRAQILSLGAGFDSLYFRLKTAGRLARAAVWEVDFPDVARRKAERIGETPELCALTGPFER 141

  Fly   145 GEVRLSPTDLHGPSYHLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEAQNCRNLLKW 209
            || ..|........|.::|:|||.|..|:..|..|.:|.:.||:.|||.||.|:|.::...|:.|
Human   142 GE-PASALCFESADYCILGLDLRQLQRVEEALGAAGLDAASPTLLLAEAVLTYLEPESAAALIAW 205

  Fly   210 IAQKFQAAVFVNYEQVNMNDRFGDVMLNNLRGRGCSLAGVESCLSLDTQRNRFKDSGWTGARAWD 274
            .||:|..|:||.|||:...|.||..||.:.|.....|.|:|....::.||.||..:|||...|.|
Human   206 AAQRFPNALFVVYEQMRPQDAFGQFMLQHFRQLNSPLHGLERFPDVEAQRRRFLQAGWTACGAVD 270

  Fly   275 MVQVYES-ISAAERQRIERLEMLDEGELLLQLFQHYCLVVAWLG 317
            |.:.|.. :.|.||:|:|.:|..||.|.......||.::.|..|
Human   271 MNEFYHCFLPAEERRRVENIEPFDEFEEWHLKCAHYFILAASRG 314

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG3793NP_001246038.1 LCM 22..211 CDD:397957 71/195 (36%)
LCMT2NP_055608.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 5/8 (63%)
AdoMet_MTases 28..197 CDD:327401 62/169 (37%)