DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3793 and PPM1

DIOPT Version :9

Sequence 1:NP_001246038.1 Gene:CG3793 / 34928 FlyBaseID:FBgn0028507 Length:341 Species:Drosophila melanogaster
Sequence 2:NP_010723.1 Gene:PPM1 / 852045 SGDID:S000002843 Length:328 Species:Saccharomyces cerevisiae


Alignment Length:337 Identity:84/337 - (24%)
Similarity:148/337 - (43%) Gaps:52/337 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EAVIATND-DASDCKRCAVRLGY-------------------WKDDYIGYFVRNQERKA------ 59
            |.:|...| ||..||..|:.:||                   |...|: ..::...|:|      
Yeast     2 ERIIQQTDYDALSCKLAAISVGYLPSSGLQRLSVDLSKKYTEWHRSYL-ITLKKFSRRAFGKVDK 65

  Fly    60 ------PEINRGYFARVKGVEMCVEKFLKKTSGNCQIINLGCGFDTLYFRLRDTAHQVKNFIELD 118
                  |.:|.|.:.|..|::..:.:|| ..:...|::|||||.|.....|......:. ::::|
Yeast    66 AMRSSFPVMNYGTYLRTVGIDAAILEFL-VANEKVQVVNLGCGSDLRMLPLLQMFPHLA-YVDID 128

  Fly   119 FPTVTARKCYTIKRNKALLARIHDEDGEVRLSPTDLHGPSYHLMGVDLRNLDEVDSKLQQAEVDY 183
            :......|...::.::.|...:.....:...||..:....|.|...||.::.|. ::|.......
Yeast   129 YNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLNDITET-TRLLDVCTKR 192

  Fly   184 SLPTIFLAECVLVYIEAQNCRNLLKWIAQKFQAAVFVNYEQV---NMNDRFGDVMLNNLR-GRGC 244
            .:|||.::||:|.|:.....:.|:..|..||...::::|:.:   ..|||||.:|.:||: .|..
Yeast   193 EIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWISYDPIGGSQPNDRFGAIMQSNLKESRNL 257

  Fly   245 SLAGVESCLSLDTQRNRFK-DSGWTGAR---AWDMVQVYES-ISAAERQRIERLEMLDEGELLLQ 304
            .:.      :|.|..::.| .|.|:.|.   ..||.:::.: |..:||:|:..|:.|||.|.|..
Yeast   258 EMP------TLMTYNSKEKYASRWSAAPNVIVNDMWEIFNAQIPESERKRLRSLQFLDELEELKV 316

  Fly   305 LFQHYCLVVA-W 315
            :..||.|:.| |
Yeast   317 MQTHYILMKAQW 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3793NP_001246038.1 LCM 22..211 CDD:397957 47/220 (21%)
PPM1NP_010723.1 LCM 5..220 CDD:397957 47/218 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344494
Domainoid 1 1.000 40 1.000 Domainoid score I3253
eggNOG 1 0.900 - - E1_KOG2918
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I1575
Isobase 1 0.950 - 0.815465 Normalized mean entropy S2071
OMA 1 1.010 - - QHG53717
OrthoFinder 1 1.000 - - FOG0001575
OrthoInspector 1 1.000 - - oto98941
orthoMCL 1 0.900 - - OOG6_100931
Panther 1 1.100 - - LDO PTHR13600
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2177
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.740

Return to query results.
Submit another query.