DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and LOC679149

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001094469.1 Gene:LOC679149 / 679149 RGDID:1591847 Length:561 Species:Rattus norvegicus


Alignment Length:617 Identity:168/617 - (27%)
Similarity:261/617 - (42%) Gaps:125/617 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 LQGKQRRDSLTLERDVFVTTNYGQVQGFKVYMYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYA 184
            :||:...:|..:.     .|:.|||:|...::.|                 .......|||||:|
  Rat    24 VQGQHSPESSPIR-----NTHIGQVRGKLDHVKD-----------------TKAGVHTFLGIPFA 66

  Fly   185 LPPTFEGRFKPPRVHRGWQLLQAVDFGPA-CPQPVRYTGATKGI---------MDMDEDCLYLNV 239
            .||....||.||.....|..::.....|| |.|.:....| :|:         :.|.|||||||:
  Rat    67 KPPVGPLRFAPPEAPEPWSGVRDGTSQPAMCLQNLDVINA-EGLKEMKLKLPPVSMSEDCLYLNI 130

  Fly   240 YSPKTGAGVAQKYPVMVYIHGGEFIRGASNLFQGHILASFYDVVVVTLNYRLGALGFLSTGDENS 304
            |:| ..|......||||:||||..:.|.::::.|.:|....|:||||:.||||.|||.|||||::
  Rat   131 YAP-AHAHEGSNLPVMVWIHGGGLMTGMASMYDGSLLTVNEDLVVVTIQYRLGVLGFFSTGDEHA 194

  Fly   305 PGNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQTRNIVRRVIAQSGSA 369
            .||:|.|||..|||||..||..|.|:.:.:|:||..|||......:|:|.::.:....|.:||.|
  Rat   195 RGNWGYLDQVAALRWVQQNIAHFGGNPDRVTIFGESAGGTCVSTHVVSPMSQGLFHGAIMESGVA 259

  Fly   370 LADWALIQDKYRAQNTSRVLGQLLGCSIESSWKLVNCLRTGRSFYEL----GNAEFSPQVGSFPW 430
            |..: ||.|  .::..|.::.::.||....|..||:||| .:|..|:    ...:..|.|     
  Rat   260 LLPY-LIAD--TSEMFSTMVAKVSGCEAMDSEALVHCLR-AKSEAEILAINKVVQMVPAV----- 315

  Fly   431 GPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGVTTQEAAFFVAQNESL 495
                                 .|..||.:.|:.|:.:..| |.:..:.||...|..:.:......
  Rat   316 ---------------------VDGEFLPRHPKELLASEDF-RPVPSIIGVNNDEYGWTIPLVMGT 358

  Fly   496 SPYYELDGRFFDQKIREHVFRYNYTLNPNGVYEAIK---------------YIYTFWPDPNNNTI 545
            :           |.|:|        |:...:...:|               .:..:..|..:...
  Rat   359 T-----------QMIKE--------LSRENLQAILKKTTAQLMLPLECSDLLMEEYMGDIEDPKT 404

  Fly   546 IRDQYINMLSDLYYRAPVDQMVKLMLEQKVPVYMYVLNTTVEALN--LPQWRKYPHDIERYFLTG 608
            ::.|:..::.|..:..|..|:....... .|||.|.....:..|.  .|...|..|..|..|:.|
  Rat   405 LQAQFTELMEDFMFVIPALQVAHFQCSH-APVYFYEFQHQITFLKDIRPPHVKADHGDEIPFVFG 468

  Fly   609 APFMD--TEFFPKKEHLQRNMWTDNDRNMSHFFMQTYTNFARYGNPTPQQVLGMHFQRAYQGEIR 671
            ..|.|  |:|            |:.::.:|...|:.:.||||:|||..:   |:.:......:.:
  Rat   469 YFFWDMKTDF------------TEEEKLLSRRMMKYWANFARHGNPNSE---GLSYWPVMDHDQQ 518

  Fly   672 YLNINTTYNSSILLNYRQTECAFWTQYLPTVI 703
            ||.::|.......|..|:.:  |||:.||..|
  Rat   519 YLQLDTQPAVGRALKARRLQ--FWTKTLPQKI 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 159/593 (27%)
LOC679149NP_001094469.1 COesterase 31..540 CDD:278561 160/600 (27%)
Aes <130..>233 CDD:223730 50/103 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336209
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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