DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and tg

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001316794.1 Gene:tg / 567631 ZFINID:ZDB-GENE-030519-1 Length:2733 Species:Danio rerio


Alignment Length:647 Identity:165/647 - (25%)
Similarity:258/647 - (39%) Gaps:171/647 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 PYHSTVDRVMGECSV-------------FLGIPYALPPTFEGRFKPPRVHRGWQLLQAVDFGPAC 214
            |.|.|   ::||..|             |||:|||.||..:.||.||:.........|..|..:|
Zfish  2169 PDHGT---LLGESEVKPITGSDSKRVTYFLGVPYARPPIGDLRFSPPQPADWTGTWNATFFRSSC 2230

  Fly   215 PQPVRYTGATKGIMDMDEDCLYLNVYSPKTGAGVAQKYPVMVYIHGGEFIRGASNLFQGHILASF 279
            .||...|.::.     .||||||||:   ..:.||:..||:|:.|     ...|:|..|..||:.
Zfish  2231 LQPGDLTDSSS-----SEDCLYLNVF---VASSVAKNAPVLVFFH-----NSGSDLLDGSYLAAV 2282

  Fly   280 YDVVVVTLNYRLGALGFLSTGDENSPGNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGA 344
            .:::|||.::|:.|.||||.|....|||||:.|||.||.||..||..|.||...:|:.....|..
Zfish  2283 GNIIVVTASFRMAAFGFLSAGSSALPGNYGLQDQAAALGWVQKNIALFGGDPTKVTVGAERNGAD 2347

  Fly   345 SAGLLMVAPQTRNIVRRVIAQSGSALADWALIQDKYRAQNTSRVLGQLLGCSIESSWKLVNCLRT 409
            .|.|.:.:|...::..|.:...||..:. |::....:||..:..|.:.|.|......:|::|||:
Zfish  2348 IASLHLTSPSASSLFSRALLMGGSVFSP-AVVMSSSKAQAQTSSLARELDCQAADPSQLLDCLRS 2411

  Fly   410 GRSFYELGNAEFSPQVGSFP---WGPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFN 471
             :..:.:..|:......|.|   |.||:|.|                  .:.:.|...:::|:|:
Zfish  2412 -KPAHSINAAQTKLLAVSGPLQAWSPVVDGN------------------VVREMPSVALQSGRFH 2457

  Fly   472 ---------------------RNIQYMTGVTTQEAAFFVAQNESLSPYYELDGRFFDQKIREHVF 515
                                 :|.:.:.|....:.||:.|.:.||...   |...|         
Zfish  2458 KAEILLGSSFEDGLISRAKNIKNFEQLQGRADSKTAFYAALSNSLGGD---DANAF--------- 2510

  Fly   516 RYNYTLNPNGVYEAIKYIYTFW--PDPNNNTIIRDQYINMLSDLYYRAPVDQMVKL-MLEQKVPV 577
                      |.||..:.|:..  |.|:...:......|...||:...|...|.:. ....:..|
Zfish  2511 ----------VKEAATWFYSLQHSPTPSGYNVFSRALENATRDLFIICPTVDMAEFWAANTQTGV 2565

  Fly   578 YMYVL--NTTVEALNLPQWRKYPHDIERYFLTGAPFMDTEFFPKKEHLQRNMWTDNDRNMSHFFM 640
            |||.|  |....:::|    ..|.|::  :|.|.|....         ||::::..::..:...|
Zfish  2566 YMYHLPENAAYNSVDL----SVPMDVQ--YLFGVPLAAE---------QRDLFSYKEKTFTLQIM 2615

  Fly   641 QTYTNFARYGNPT-----------------PQ---QVLGMHFQRAYQGEIRYLNINTTYNSSILL 685
            ....||.:.|||.                 ||   .|.|    |||: |:....:|..       
Zfish  2616 NYMANFIKSGNPNLPLAASRTSFGKFLPPWPQFMPHVGG----RAYK-ELSSTLVNRK------- 2668

  Fly   686 NYRQTECAFWTQYLPTV---------------IGVLVPTYPPTTEYWWEPKEPLQIAFWSMS 732
            |.::::|:||:||:|.:               .||..||.        ||| ||..|.::::
Zfish  2669 NLQRSQCSFWSQYVPALTSSTAKFSCGTSAEETGVQTPTQ--------EPK-PLTPASFTLT 2721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 150/593 (25%)
tgNP_001316794.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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