DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and nlgn3b

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_005165239.1 Gene:nlgn3b / 567415 ZFINID:ZDB-GENE-060526-197 Length:846 Species:Danio rerio


Alignment Length:914 Identity:249/914 - (27%)
Similarity:365/914 - (39%) Gaps:222/914 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 TLERDVFVTTNYGQVQGFKVYMYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFK 194
            ||.....|.|..|:::|.:|                :.....:|....:||:|||.||..|.||.
Zfish    41 TLTYQPTVNTALGRLRGMRV----------------AVATEGLGPVDQYLGVPYAAPPVGEKRFM 89

  Fly   195 PPRVHRGWQ-LLQAVDFGPACPQPVRYTGATKGIM-------DMD----------EDCLYLNVYS 241
            ||.....|. :..|..|.|.|||.||  .|...||       :||          |||||:|:|.
Zfish    90 PPDAPSAWSGVRNATRFPPVCPQTVR--NAVPDIMMPVWATYNMDTVATYLQEQSEDCLYMNIYV 152

  Fly   242 P------KTGAGVA---------------QKYPVMVYIHGGEFIRGASNLFQGHILASFYDVVVV 285
            |      :||...|               ...|||::||||.::.|..|:..|.:|||:.:|:|:
Zfish   153 PTQSGTKRTGDMSADTERTEDDGLRDSRDDPRPVMLFIHGGSYMEGTGNIMDGSVLASYGNVIVI 217

  Fly   286 TLNYRLGALGFLSTGDENSPGNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLM 350
            |||||:|.||||||||:.:.||||:|||..||||:..||.:|.||...:|:||.|.|.:...||.
Zfish   218 TLNYRVGILGFLSTGDQAAKGNYGLLDQIQALRWINKNIGYFGGDPGRVTVFGSGIGASCVSLLT 282

  Fly   351 VAPQTRNIVRRVIAQSGSALADWALIQDKYRAQNTSRVLGQLLGCSIESSWKLVNCLRTGRSFYE 415
            ::..:..:..|.|.||||||:.|::   .|:....:|:|.:.:||::..:..||.|::. ||:.|
Zfish   283 LSHHSEGLFHRAIIQSGSALSSWSV---NYQPVKYTRLLAERVGCNVLDTQDLVLCMQK-RSYRE 343

  Fly   416 LGNAEFSPQVGSFPWGPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGV 480
            |...|..|......:|||:|.:. :|.|                 ||.|:..|:| .|...|.||
Zfish   344 LVEQEIQPARFHVAFGPVIDGDL-IPDD-----------------PEVLMEQGEF-LNYDIMLGV 389

  Fly   481 TTQEAAFFVAQNESLSPYYE--LDGRFFDQKIREHV-FRYNYTLNPNGVYEAIKYIYTFWPDPNN 542
            ...|...||   |.:....|  :.|..||..:.:.| ..|.|....:.:.|.||::||.|.|.:|
Zfish   390 NQGEGFRFV---EGVVEPEEGGVSGSDFDFTVSDFVDSLYGYPEGKDTLRETIKFMYTDWADRDN 451

  Fly   543 NTIIRDQYINMLSDLYYRAPVDQMVKLMLEQKVPVYMYVLNTTVEALNLPQWRKYPHDIERYFLT 607
            ....|...:.|.:|..:..|......|......|.:.|......::...|.|....|..|..::.
Zfish   452 PETRRKTLVAMFTDHQWVEPAVVTADLHARYGSPTFFYAFYHHCQSPMKPPWADSAHGDELPYVF 516

  Fly   608 GAPFM-DTEFFPKKEHLQRNMWTDNDRNMSHFFMQTYTNFARYGN---PTPQQVLGMH-----FQ 663
            |.|.: .||.||..       ::.||..:|...|..:||||:.|:   |.||....:|     |:
Zfish   517 GVPLIGPTELFPCN-------FSRNDIMLSAVVMTYWTNFAKTGDPNKPVPQDTKFIHTKANRFE 574

  Fly   664 R---AYQGEIRYLNINTTYNSSILLNYRQTECAFWTQYLP---------------TVIGVLVPTY 710
            .   |..|....|.::......:..:||.|:.|||...:|               |.:..|:.|:
Zfish   575 EVTWAKYGPHDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYTSTTTRVPPLLTTH 639

  Fly   711 --------------------PPTTEYWWEPKEPLQIA-------FWSMSVA----CFFLIVLVVI 744
                                ||.:.   ....||.||       ..|:::|    ..||.|| ..
Zfish   640 SSHSATPRPGGNKARTSGKQPPQST---ARSGPLVIANPRDYSTELSVTIAVGASLLFLNVL-AF 700

  Fly   745 CCIMWRNAKRQSDRFYDEDVFINGEGLEPEQDTRGVDNAHMVT-----NHHALRSRDNI-YEYRD 803
            ..:.:|..||.......:..        |::.|..:|..:..|     |...|...|.: .....
Zfish   701 AALYYRKDKRSRQDTPPQPA--------PQRQTPPIDLNYAPTSISGGNQEELSLCDPLRLTPAS 757

  Fly   804 SPSTKTLASKAHTDTTSLRSPSSLAMTQKSSSQASLKSGISLKETNGHLVKQSERAATPRSQQNG 868
            ||....|..:...|...|.:|||:|||..|.:..  .:.::|               ||.|    
Zfish   758 SPRDYALTLRRSPDDIPLMTPSSVAMTPNSGTMT--PNTVTL---------------TPNS---- 801

  Fly   869 STAKVASPPVEEKRLLQPLSSTPVT------QLQAEPAKRVPTAASVSGSSRSTTPVPSARSTTT 927
                              ::.||.|      .|...|:.. |......|.:.:|.|.|       
Zfish   802 ------------------VTMTPNTITMSPNSLMGYPSMH-PYNTFTHGYNSTTLPHP------- 840

  Fly   928 HTTT 931
            |:||
Zfish   841 HSTT 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 190/614 (31%)
nlgn3bXP_005165239.1 COesterase 40..609 CDD:278561 192/618 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D80457at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43903
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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