DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and si:dkey-30c15.17

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_003200472.2 Gene:si:dkey-30c15.17 / 561375 ZFINID:ZDB-GENE-060503-450 Length:657 Species:Danio rerio


Alignment Length:620 Identity:161/620 - (25%)
Similarity:241/620 - (38%) Gaps:161/620 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 DVFVTTNYGQVQGFKVYMYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFKPPRV 198
            |..|.|..|:|:|.                       .:.:..||.|||||.||..:.|:.||..
Zfish   135 DPVVVTLLGRVRGL-----------------------TLEKAHVFYGIPYADPPVGDKRWAPPSP 176

  Fly   199 HRGWQLLQAVDF-GPACPQPVRYTGATKGIMDMDEDCLYLNVY--------SPKTGAGVAQKYPV 254
            ...|.......| .|||.|......:.....::.||||||||:        .||..|     .||
Zfish   177 VSPWLYTYNATFPRPACMQMCAGEFSRLCPPEVSEDCLYLNVFVPVSVNLSLPKVTA-----LPV 236

  Fly   255 MVYIHGGEFIRGASN--LFQGHILASFYDVVVVTLNYRLGALGFLSTG---DENSPGNYGILDQA 314
            ||:||||:||.|:::  |:.|..::::.:.|||.:.|||||.|||.||   :.::.||||||||.
Zfish   237 MVWIHGGDFIAGSASKPLYDGRYISNYSNTVVVNMEYRLGAFGFLVTGKDPESSAVGNYGILDQQ 301

  Fly   315 MALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQTRNIVRRVIAQSGSALADWAL-IQD 378
            .||.||.:||..|.||.|.:||||..||..|..|.::...:..:.|....||    ..::| ::.
Zfish   302 AALHWVQENIAAFGGDPNKVTLFGESAGAQSVSLHLMMQSSETLFRHAAIQS----LPFSLPLKT 362

  Fly   379 KYRAQNTSRVLGQLLGCS-------------------IESSWKLVNCLRTGRSFYELGNAEFSPQ 424
            ::.|........:|..||                   |:|..|::|..|    |.|:...     
Zfish   363 RWDAMKLGWDFAKLTNCSVFDLPCMRSLSSEDVLNAQIKSGSKIINPFR----FLEVFET----- 418

  Fly   425 VGSFPWGPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGVTTQEAAFFV 489
                 |||.:                  |.:.|.:.|.|..:.|.:......:.|.|::|...||
Zfish   419 -----WGPFI------------------DGQLLKEQPITAFQKGHWQSYKPVILGTTSEEGVMFV 460

  Fly   490 AQNESLSPYYELDGRFFDQKIREHVFRYNYTLNPNGVYE--AIKYIYTFWPDPNNNTIIRDQYI- 551
            .:|                 ..:.|......|....:::  |:|.::.:.|...|    :|:.: 
Zfish   461 YRN-----------------FNKSVSMLECVLYTAAIFKQHALKILHKYIPFYRN----QDRRVM 504

  Fly   552 --NMLSDLYYRAPVDQMVKLMLEQKVPVYMYVLNTTVEALNLPQWRKYP-------HDIERYFL- 606
              .|::|..:..|..|..:..::....|:|||.:......|:  |.:..       |..|..|| 
Zfish   505 LSQMVTDYVFSCPARQSARSGVKVGGAVWMYVFDHAPSDPNI--WAELTFCYNHSCHGAELPFLF 567

  Fly   607 TGAPFMDTEFFPKKEHLQRNM---WTDNDRNMSHFFMQTYTNFARYGNPTPQQVLGMHFQRAYQG 668
            ..||..:..|.|::..|...|   |               ..||..|:|..:.. ..||.|..:.
Zfish   568 DSAPSTNFTFTPQERLLANRMACYW---------------GMFAHTGDPNSRDE-QTHFCREQRL 616

  Fly   669 EI--RYLNI------NTTYNSSILLNYRQTECAFW 695
            .:  ||.:|      |.|..|......|...|.||
Zfish   617 PVWPRYTDIGGWTILNLTLQSHPQHGSRDHFCDFW 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 159/618 (26%)
si:dkey-30c15.17XP_003200472.2 COesterase 134..651 CDD:306613 159/618 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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