DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and gas

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_611678.1 Gene:gas / 37572 FlyBaseID:FBgn0034736 Length:566 Species:Drosophila melanogaster


Alignment Length:580 Identity:172/580 - (29%)
Similarity:235/580 - (40%) Gaps:164/580 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 VTTNYGQVQG-FKVYMYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFKPPRVHR 200
            :.|.|||::| .:..:||.       .||:|           |.|||:|.||..|.||:.|:...
  Fly    35 LATKYGQLKGQQRRTLYDG-------EPYYS-----------FEGIPFAQPPVGELRFRAPQPPS 81

  Fly   201 GWQLLQAVDFGPACP-QPVRYTGATKGIMDMDEDCLYLNVY-----SPKTGAGVAQKYPVMVYIH 259
            .||.::...:....| |....|.|.:|    .|||||||||     |||       ..||||:|.
  Fly    82 SWQGVRDCTYAREKPMQRNSITNAAEG----SEDCLYLNVYAKRLESPK-------PLPVMVWIF 135

  Fly   260 GGEF-IRGASNLFQGHILASFYDVVVVTLNYRLGALGFLSTGDE--NSPGNYGILDQAMALRWVY 321
            ||.| :.|||....|......:|:::||:|||:|.|||||..|:  ..|||.|:.||..|||||.
  Fly   136 GGGFQVGGASRELYGPDYFMKHDILLVTINYRVGVLGFLSLKDKELKIPGNAGLKDQIQALRWVK 200

  Fly   322 DNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQTRNIVRRVIAQSGSALADWALIQDKYRAQNTS 386
            :||..||||..|||:||..|||||..:||...|.|.:..|.|.||||||..||...|:...|...
  Fly   201 ENIASFNGDPESITVFGESAGGASTHILMQTEQARGLFHRAIVQSGSALCAWATQPDRKWPQRLG 265

  Fly   387 RVLGQLLGCSIESSWKLV---------------NCLRT---GRSFYELGNAE-FSPQVG------ 426
            :.||  ...::||..:|:               |.:.|   .|.:..|..|. ..|.||      
  Fly   266 KELG--YAGNLESEKELLEFFQQIPASKLAQYCNSIVTQEEQRDYEILAFAPVIEPYVGDDCVIP 328

  Fly   427 -------SFPWGPVLDHNFTLP---GDDWYEGWREKDWRFLTQTPETLIRAGKFNRNI--QYMTG 479
                   |..||.      ::|   |...:||.    :.:.|...:.|.....|...|  |....
  Fly   329 KSQQEQLSSAWGN------SIPMIIGGTSFEGL----FSYRTTLDDPLYMLSAFEAIIPKQVRDA 383

  Fly   480 VTTQEAAFFVAQNESLSPYYELDGRFFDQKIREHVFRYNYTLNPNGVYEA--IKYIYTFWPDPNN 542
            :..:|.|..|.:         |...:||...|..:          .:||.  |..|..||.|.:.
  Fly   384 IDKEELAEMVRR---------LKKSYFDDPDRASM----------ELYECLHILSIKNFWHDIHR 429

  Fly   543 NTIIRDQYINMLSDLYYRAPVD-------------QMVKLMLEQKVPVYMY--VLNTTVEALNLP 592
            ..:.|..|...|....||..:|             :.|:.:.......||:  :|::.::. |.|
  Fly   430 TLLARLAYATNLPTYLYRFDMDSPHFNHYRILKCGKKVRGVCHADDISYMFYGILSSKLDK-NSP 493

  Fly   593 QWRKYPHDIERYFLTGAPFMDTEFFPKKEHLQRNMWTDNDRNMSHFFMQTYTNFARYGNP 652
            ::|    .|||  |.|                  ||               |:||..|:|
  Fly   494 EYR----TIER--LVG------------------MW---------------TSFATTGDP 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 172/580 (30%)
gasNP_611678.1 COesterase 28..534 CDD:278561 172/580 (30%)
Aes <117..>222 CDD:223730 53/111 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440426
Domainoid 1 1.000 98 1.000 Domainoid score I1867
eggNOG 1 0.900 - - E2759_KOG1516
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46967
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.740

Return to query results.
Submit another query.