DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and Glt

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster


Alignment Length:996 Identity:199/996 - (19%)
Similarity:325/996 - (32%) Gaps:352/996 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LLVLIGTCFIQTRGQTRDPRFYSRPGVDYHWPNPG-DPDYRTYTFNDRRYGHYQPNGYGANYPGR 80
            ||:::..|                 |...|..:.| .|||..|:..|.|                
  Fly     4 LLLVLALC-----------------GAQVHAHSVGLRPDYNDYSDEDTR---------------- 35

  Fly    81 NPPGQYPQGMPNEDRFRFDPNDPNARTQFPGVLAGWREDLQGKQRRDSLTLERDVFVTTNYGQVQ 145
                  ...:|       :|..|          ..|:.:.:..|.::::....:|      ||:.
  Fly    36 ------RDWLP-------EPLKP----------VPWQSETRYAQPQEAVVQAPEV------GQIL 71

  Fly   146 GFKVYMYDNPDPKSFYRPYHSTV-DRVMGECSVFLGIPYALPPTFEGRFKPPRVHRGWQLLQAVD 209
            |..               .|.|: :|.:   :.||||.|.            .|..|....||. 
  Fly    72 GIS---------------GHKTIANRPV---NAFLGIRYG------------TVGGGLARFQAA- 105

  Fly   210 FGPACPQPVRYTGATKGIM---------DMD------------EDCLYLNVYSPKTGAGVAQKYP 253
                  ||:.|.|.....:         ::|            :|||.|::|:|:.    |.:.|
  Fly   106 ------QPIGYQGRVNATVQSPNCAQFPELDRLRLSESRGENVDDCLTLDIYAPEG----ANQLP 160

  Fly   254 VMVYIHGGEFIRGASNLFQ-GHILASFYDVVVVTLNYRLGALGFLSTGDENSPGNYGILDQAMAL 317
            |:|::||.....|.|...| .::|..  ||::|::||||...||||...:..|||..:.|..:||
  Fly   161 VLVFVHGEMLFDGGSEEAQPDYVLEK--DVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLAL 223

  Fly   318 RWVYDNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQTRNIVRRVIAQSGSALADWALIQDKYRA 382
            .|:..|:..|.|:...:||.|...|...|..|.::.:..|:.:::|.|||:||..: ||.:  :.
  Fly   224 EWLQRNVVHFGGNAGQVTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPY-LIDN--QP 285

  Fly   383 QNTSRVLGQLLGC---SIESSWK----LVNCL------RTGRSFYE--LGNAEFS-PQVGSF--- 428
            .:|.....:|..|   ||..|.:    |.:||      :...:|.:  |.|.... .|:|.|   
  Fly   286 LDTLSTFARLARCPPPSINPSAQGLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLV 350

  Fly   429 ---PWGPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGVTTQEAAFFVA 490
               |.|                        ||...|.:|  |...:..:..:.|.|...:||.|:
  Fly   351 VGDPLG------------------------FLPSHPASL--ATNSSLALPMIIGATKDASAFIVS 389

  Fly   491 QNESLSPYYELDGRFFDQKIREHVFRYNYTLNPNGVYEAIKYIYTFWPDPNNN------------ 543
                         |.:||..|         |....|.:.|..:......|:.:            
  Fly   390 -------------RIYDQLAR---------LQSRNVSDYIDVVLRHTAPPSEHRLWKQWALREIF 432

  Fly   544 TIIRDQYINM---------LSD-LYYRAPVDQMVKLMLEQKVPVYMYVLNTTVEALNLPQWRKYP 598
            |.|::|..::         ||: :.|||||...:. ...:.||.|:|..:             |.
  Fly   433 TPIQEQTASLQTVAPGLLELSNYILYRAPVINSIS-QSYRSVPAYLYTFD-------------YR 483

  Fly   599 HDIERY--------FLTGAPFMDTE--FFPKKEHLQRNMWTDNDRNMSHFFMQTYTNFARYGNPT 653
            .:..|:        |...|...|..  .||......|  ....||::|...:..:.|||..|.|.
  Fly   484 GEHHRFGHLSNPLPFGVDASLSDDSVYLFPYPPEASR--LNPLDRSLSRALVTMWVNFATTGVPN 546

  Fly   654 PQQVLGMHFQRAYQGEIRYLN-------INTTYNSSILL-NYR----QTECAFWTQYLPTVIGVL 706
            |...:.......|...:|:.|       ::..:...|.| |||    .|     |.:.|.:....
  Fly   547 PSSGVWPQATSEYGPFLRFTNNQQSPLELDPHFGEGIYLPNYRVIYKPT-----TNFSPPITTTT 606

  Fly   707 VPTYPPTT----------EYW----------WEPKEPLQIAFWSMSVACFFLIVLVVICCIMWRN 751
            ..|...||          ..|          |.|.:|..:.........|          |..|.
  Fly   607 TTTTTTTTTSRPYAYNPYANWQNRPSQQHPNWHPADPEYVRAQEARQQEF----------IRERE 661

  Fly   752 AKRQSDRFYDEDVFINGEGLEPEQDTRGVDNAHMVTNHHALRSRDNIYEYRDSPSTKTLASKAHT 816
            .:|:..:..|:..:       |:|:.|.             :..:.|.:.|:...          
  Fly   662 QRRREQQLRDQQRY-------PQQEPRE-------------QQDERIRQQREQEE---------- 696

  Fly   817 DTTSLRSPSSLAMTQKSSSQASLKSGISLKETNGHLVKQSERAATPRSQQNGSTAKVASPPVEEK 881
                       .:.|:...:..|:....|:|   .:.:|.||....|.||.           .|:
  Fly   697 -----------RLRQQREQEERLRQQRELEE---RIRQQQEREQYEREQQE-----------REQ 736

  Fly   882 RLLQPLSSTPVTQLQAEPAKR 902
            |..:.|......:.|.:|.::
  Fly   737 REREELERQQREREQQQPEQQ 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 148/649 (23%)
GltNP_001245946.1 COesterase 55..579 CDD:278561 143/639 (22%)
Aes <146..345 CDD:223730 63/207 (30%)
RILP-like <677..>717 CDD:304877 8/76 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440422
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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