DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and CG5397

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001259865.1 Gene:CG5397 / 33313 FlyBaseID:FBgn0031327 Length:665 Species:Drosophila melanogaster


Alignment Length:573 Identity:143/573 - (24%)
Similarity:218/573 - (38%) Gaps:161/573 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 QVQGFKVYMYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFKPPRVHRGWQLLQA 207
            :|:||:     ||....:                .|||:.||.||....|:..|...|......|
  Fly    62 RVEGFR-----NPSTGIY----------------SFLGMHYAEPPVGPLRYSRPVYKRLAGDFNA 105

  Fly   208 VDFGPAC----PQ-PVRYTGATKGIMDMDEDCLYLNVYSPK-----TGAGVAQKYPVMVYIHGGE 262
            ...||.|    || |.|..|        |||||.||||:|:     ||      .||.|:||.|.
  Fly   106 TKHGPPCIQPHPQFPQRIIG--------DEDCLLLNVYTPQMPDETTG------LPVFVWIHPGG 156

  Fly   263 FIRGASNLFQGHILASFYDVVVVTLNYRLGALGFLSTGDENSPGNYGILDQAMALRWVYDNIEFF 327
            :..|::..:....:|. ...:||...||||:||.:..|.:...||..:.|.|.|||||.|.|.:|
  Fly   157 YRYGSAAQYDATPMAQ-RGAIVVAPQYRLGSLGIMGDGTKQFDGNLAMFDLAAALRWVTDYISYF 220

  Fly   328 NGDRNSITLFGPGAGGASAGLLMVAPQTRNI--VRRVIAQSGSALADWALIQDKYRAQNTSRVLG 390
            .|:...:...|.|:|.|||..|.::|.:|:.  |..|:|.||:||:.:|:  ||...|:...| .
  Fly   221 GGNPKQVQAIGHGSGAASAMYLSMSPTSRSAGDVHGVVAMSGTALSQYAM--DKEPVQSVQEV-A 282

  Fly   391 QLLGCSIESSWKLVNCLRT-------------------GRSFYE--LGNAEFSPQVGSFPWGPVL 434
            ::.||...:..::|||||:                   ||:..:  .||..|.|.:.|      .
  Fly   283 KINGCPTGNELEIVNCLRSKSAEDIIKNDDKVQTERLAGRALVKGLTGNVGFQPHIES------E 341

  Fly   435 DHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGVTTQEAA------------- 486
            |....||.             .:...||..:::..|: .|..:||||..|.|             
  Fly   342 DDGRALPS-------------LIVGEPEQQLKSSNFS-GIPLLTGVTKHETANSVTVETIEKVFG 392

  Fly   487 ----FFVAQNES---LSPYYELDGRFFDQKIREHVFRYNYTLNPNGVYEAIKYIYTFW--PDPNN 542
                |..:.::|   |:.:.::| :...|..:..:......|.|.        :...|  |...|
  Fly   393 SAEQFLGSLSDSLNKLTSFLKID-KLTGQIAKPELPGLTSVLTPT--------LQDVWKVPQALN 448

  Fly   543 NTIIRDQYINMLSDLYYRAPVDQMVKLMLEQKVPVYMYVL---NTTVEALNLPQWRKYPHDIERY 604
            ...:..:.:...:|:.:..|. .:...:..:..|.:||..   .|..:.:|              
  Fly   449 VDQVLSKVVESTTDVLFNLPA-VLTTQVWSRLAPAFMYSFEYNGTKSKGIN-------------- 498

  Fly   605 FLTGAPFMDTEFFPKKEHLQRN-----MWTDNDRNMSHFFMQTYTNFARYGNP 652
            ||.|.|.:......|.|.:...     |:..||               .:|||
  Fly   499 FLKGLPIVSETAHDKPETVGHGDEIGYMFDAND---------------IFGNP 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 143/573 (25%)
CG5397NP_001259865.1 COesterase 62..600 CDD:278561 143/573 (25%)
Aes 82..>261 CDD:223730 69/193 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 98 1.000 Domainoid score I1867
eggNOG 1 0.900 - - E2759_KOG1516
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46967
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.900

Return to query results.
Submit another query.