DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and Ces2i

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_008758816.2 Gene:Ces2i / 292152 RGDID:1565045 Length:558 Species:Rattus norvegicus


Alignment Length:644 Identity:182/644 - (28%)
Similarity:262/644 - (40%) Gaps:153/644 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 GVLAGWRED--------LQGKQRRDSLTLERDVFVTTNYGQVQGFKVYMYDNPDPKSFYRPYHST 167
            |.|.||...        ||....:||.:..|:    |..|||:|..|::   .|.||   ..|: 
  Rat     4 GRLPGWLYVVACGLLLLLQHVHGQDSASPIRN----TQTGQVRGSFVHV---KDTKS---GVHT- 57

  Fly   168 VDRVMGECSVFLGIPYALPPTFEGRFKPPRVHRGWQLLQAVDFGPACPQPVRYTGATKGIM---- 228
                      |||||:|.||.....|.||.....|   ..|..|.:.|.....|...|...    
  Rat    58 ----------FLGIPFAKPPVGPLHFAPPEDPEPW---SGVRDGTSQPDMCLQTDIMKEDFIKEM 109

  Fly   229 -------DMDEDCLYLNVYSPKTGAGVAQKYPVMVYIHGGEFIRGASNLFQGHILASFYDVVVVT 286
                   .|.|||||||:|:| ..|......||||:||||..:.|::::.....||:..::|:|.
  Rat   110 KLTMHPTPMSEDCLYLNIYTP-AHAREGSNLPVMVWIHGGGLVLGSASMNVASTLAATEEIVIVA 173

  Fly   287 LNYRLGALGFLSTGDENSPGNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLMV 351
            :.||||.|||.|||||::.||:|.|||..||.||..||.:|.|:...:|:||..|||.|....:|
  Rat   174 IQYRLGILGFFSTGDEHARGNWGYLDQVAALCWVQQNIAYFGGNHGKVTIFGVSAGGTSVSSHVV 238

  Fly   352 APQTRNIVRRVIAQSGSALADWALIQDKYRAQNTSRV----LGQLLGCSIESSWKLVNCLRTGRS 412
            :|.::.:....|.|||.||.. .||.|      ||.|    :..|.||....|..|:.||| .:|
  Rat   239 SPMSKGLFHGAIMQSGVALLP-DLISD------TSEVVYKTVANLSGCEASDSEALIRCLR-AKS 295

  Fly   413 FYEL--GNAEFSPQVGSFPWGPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQ 475
            ..|:  .|..|.                .:||        ..|.:||.:.|:.|:.:|.|: .:.
  Rat   296 KQEILAINQVFK----------------MIPG--------VVDGKFLPKHPQELLASGDFH-PVP 335

  Fly   476 YMTGVTTQEAAFFVAQNESLSPYYELDGRFFDQKIREHVFR---------------YNYTLNPNG 525
            .:.||.|.|....|.....|                :|:.:               ....|.|  
  Rat   336 SIIGVNTDECGLGVPMFMGL----------------DHIIKKITRDTLPTVLKSTAAQMMLPP-- 382

  Fly   526 VYEAIKYIY-TFWPDPNNNTIIRDQYINMLSDLYYRAPVDQMVKLMLEQKVPVYMYVLNTTVEAL 589
              |.|..|. .:..|..:...:::|:..||.|..:..|..::......| .|||.|      |..
  Rat   383 --ECIDLIMEEYMGDTEDPETLQEQFKEMLGDFMFVIPALEVAHFQRSQ-APVYFY------EFQ 438

  Fly   590 NLPQWRKY--------PHDIERYFLTGAPF--MDTEFFPKKEHLQRNMWTDNDRNMSHFFMQTYT 644
            :||.:.|.        .|..:..|:..:.|  |:.:...::|.|:|.:            |:.:.
  Rat   439 HLPSFIKQVRPSHVKADHGDDILFVFSSYFWGMNFDITEEEELLKRRV------------MKYWA 491

  Fly   645 NFARYGNPTPQQVLGMHFQRAYQGEIRYLNINTTYNSSILLNYRQTECAFWTQYLPTVI 703
            ||||.|||..:.   :.:........:||.:||.......|..|:.:  |||:.||..|
  Rat   492 NFARNGNPNSED---LPYWPVLDHNEQYLQLNTQPAVGRALKARRLQ--FWTKTLPQKI 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 167/603 (28%)
Ces2iXP_008758816.2 COesterase 30..537 CDD:395084 168/608 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336204
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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