DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and Ces1c

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_006255234.2 Gene:Ces1c / 24346 RGDID:2571 Length:551 Species:Rattus norvegicus


Alignment Length:599 Identity:183/599 - (30%)
Similarity:279/599 - (46%) Gaps:98/599 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 VTTNYGQVQGFKVYMYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFKPPRVHRG 201
            |.|..|:|.|..|.:      :.|.:|           .:||||:|:|.||....||.||.....
  Rat    28 VDTTKGKVLGKYVSL------EGFTQP-----------VAVFLGVPFAKPPLGSLRFAPPEPAEP 75

  Fly   202 WQLLQ-AVDFGPACPQ---------PVRYTGATKGIMDMDEDCLYLNVYSPKTGAGVAQ--KYPV 254
            |..:: ...:.|.|.|         .:..||.....::..|||||||:|||   |.:.:  :.||
  Rat    76 WSFVKNTTTYPPMCSQDGVVGKLLADMLSTGKENIPLEFSEDCLYLNIYSP---ADLTKNSRLPV 137

  Fly   255 MVYIHGGEFIRGASNLFQGHILASFYDVVVVTLNYRLGALGFLSTGDENSPGNYGILDQAMALRW 319
            ||:||||..|.|.::.:.|..|::..:|||||:.||||..|..|||||:|.||:..|||..||||
  Rat   138 MVWIHGGGLIIGGASPYSGLALSAHENVVVVTIQYRLGIWGLFSTGDEHSRGNWAHLDQLAALRW 202

  Fly   320 VYDNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQTRNIVRRVIAQSGSALADWALIQDKYRAQN 384
            |.|||..|.|:.:|:|:||..|||.|..:|:::|..:|:..|.|::||..|   ....||...|.
  Rat   203 VQDNIANFGGNPDSVTIFGESAGGVSVSVLVLSPLAKNLFHRAISESGVVL---TTNLDKKNTQA 264

  Fly   385 TSRVLGQLLGCSIESSWKLVNCLRTGRSFYELGNAEFSPQVGSFPWGPVLDHNFTLPGDDWYEGW 449
            .::::..|.||:..||..:|.|||. ::..||  .|.:.::.:.....|:| ...||        
  Rat   265 VAQMIATLSGCNNTSSAAMVQCLRQ-KTEAEL--LELTVKLDNTSMSTVID-GVVLP-------- 317

  Fly   450 REKDWRFLTQTPETLIRAGKFNRNIQYMTGVTTQEAAFFV--AQNESLSPYYELDGRFFDQKIRE 512
                     :|||.::....|| .:.|:.|...||..:.:  .....||     :||..::....
  Rat   318 ---------KTPEEILTEKSFN-TVPYIVGFNKQEFGWIIPTMMGNLLS-----EGRMNEKMASS 367

  Fly   513 HVFRYNYTLN-PNGVYEAI--KYIYTFWPDPNNNTIIRDQYINMLSDLYYRAPVDQMVKLMLEQK 574
            .:.|::..|| ...|..||  ||: ....||...   ::..::|.||:::..|...|.:.:.:..
  Rat   368 LLRRFSPNLNISESVIPAIIEKYL-RGTDDPAKK---KELLLDMFSDVFFGIPAVLMSRSLRDAG 428

  Fly   575 VPVYMYVLNTTVEALN--LPQWRKYPHDIERYFLTGAPFMDTEFFPKKEHLQRNMWTDNDRNMSH 637
            .|.|||........::  .||..:..|..|.:.:.|.||:       ||..     ::.:.|:|.
  Rat   429 APTYMYEFQYRPSFVSDQRPQTVQGDHGDEIFSVFGTPFL-------KEGA-----SEEETNLSK 481

  Fly   638 FFMQTYTNFARYGNPTPQQVLGMHFQRAYQGEIRYLNINTTYNSSILLNYRQTECAFWTQYLPTV 702
            ..|:.:.||||.|||..:   |:.....|..:..||.|..|...:..|  :..|.||||:     
  Rat   482 LVMKFWANFARNGNPNGE---GLPHWPEYDQKEGYLQIGATTQQAQKL--KGEEVAFWTE----- 536

  Fly   703 IGVLVPTYPPTTEY 716
               |:...||.||:
  Rat   537 ---LLAKNPPQTEH 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 175/576 (30%)
Ces1cXP_006255234.2 COesterase 24..534 CDD:395084 175/576 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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