DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and Cel

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_058693.2 Gene:Cel / 24254 RGDID:2331 Length:612 Species:Rattus norvegicus


Alignment Length:606 Identity:172/606 - (28%)
Similarity:261/606 - (43%) Gaps:133/606 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 VFLGIPYALPPTFEGRFKPPRVHRGWQ-LLQAVDFGPACPQPVRYTGATKGIMDMDEDCLYLNVY 240
            :|.|||:|...|.|.    |:.|.||| .|:|.||...|.|.......|.|    .|||||||::
  Rat    50 IFKGIPFATAKTLEN----PQRHPGWQGTLKATDFKKRCLQATITQDDTYG----QEDCLYLNIW 106

  Fly   241 SPKTGAGVAQKYPVMVYIHGGEFIRGASN--------LFQGHILASFYDVVVVTLNYRLGALGFL 297
            .|:....|:...||||:|:||.|:.|:..        |:.|..:|:..:|:|||.|||:|.||||
  Rat   107 VPQGRKQVSHDLPVMVWIYGGAFLMGSGQGANFLKNYLYDGEEIATRGNVIVVTFNYRVGPLGFL 171

  Fly   298 STGDENSPGNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQTRNIVRRV 362
            ||||.|.|||:|:.||.||:.||..||..|.||.::||:||..||.||..|..::|..:.::||.
  Rat   172 STGDANLPGNFGLRDQHMAIAWVKRNIAAFGGDPDNITIFGESAGAASVSLQTLSPYNKGLIRRA 236

  Fly   363 IAQSGSALADWALIQDKYRAQNT---SRVLGQLLGCSIESSWKLVNCLR-------TGRSFYELG 417
            |:|||.||:.||:      .:|.   ::.:.:.:||..|.:.|:..||:       |......|.
  Rat   237 ISQSGVALSPWAI------QENPLFWAKTIAKKVGCPTEDTAKMAGCLKITDPRALTLAYRLPLK 295

  Fly   418 NAEFSPQVGSFPWGPVLDHNFTLPGD--DWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGV 480
            :.|: |.|....:.||:|.:| :|.|  :.|:.                      ..:|.|:.|:
  Rat   296 SQEY-PIVHYLAFIPVVDGDF-IPDDPINLYDN----------------------AADIDYLAGI 336

  Fly   481 TTQEAAFFVAQNESLSPYYELDGRFF-----------DQKIREHVFRYNYTL-NPNGVYEAIK-- 531
            .                  ::||..|           .|.:.|..|   |.| :.:.|.:.:|  
  Rat   337 N------------------DMDGHLFATVDVPAIDKAKQDVTEEDF---YRLVSGHTVAKGLKGT 380

  Fly   532 ----YIYT-FWPDPNNNTIIRDQYINMLSDLYYRAPVDQMVKLMLEQ------KVPVYMYVLNTT 585
                .||| .|....:...::...:...:|:.:..|.:    :.|.|      ....|.|:.:..
  Rat   381 QATFDIYTESWAQDPSQENMKKTVVAFETDILFLIPTE----MALAQHRAHAKSAKTYSYLFSHP 441

  Fly   586 VEALNLPQWRKYPHDIERYFLTGAPFMDTEFFPKKEHLQRNMWTDNDRNMSHFFMQTYTNFARYG 650
            ......|:|....|..:..::.|.||..    |.....|       ||.:|...:..:||||:.|
  Rat   442 SRMPIYPKWMGADHADDLQYVFGKPFAT----PLGYRAQ-------DRTVSKAMIAYWTNFAKSG 495

  Fly   651 NPT-PQQVLGMHFQRAYQGEIRYLNINTTYNSSILLNY-RQTECAFWT---QYLPTVIGVLVP-- 708
            :|. ....:..|:.........||:||....|:.:..: |:....||.   :.||||:|...|  
  Rat   496 DPNMGNSPVPTHWYPYTTENGNYLDINKKITSTSMKEHLREKFLKFWAVTFEMLPTVVGDHTPPE 560

  Fly   709 ------TYPPTTEYWWEPKEP 723
                  ..|||.:....|..|
  Rat   561 DDSEAAPVPPTDDSQVVPVPP 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 159/565 (28%)
CelNP_058693.2 COesterase 26..542 CDD:278561 159/565 (28%)
Aes <118..>247 CDD:223730 62/128 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 553..612 7/29 (24%)
4 X 11 AA tandem repeats, O-glycosylated region 556..599 6/26 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43903
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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