DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and nlg-1

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001257226.1 Gene:nlg-1 / 181484 WormBaseID:WBGene00006412 Length:847 Species:Caenorhabditis elegans


Alignment Length:914 Identity:219/914 - (23%)
Similarity:348/914 - (38%) Gaps:262/914 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 VTTNYGQVQGFKVYMYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFKPPRVHRG 201
            |||::|.|:| :|...:..|               :...:.:|||||.:.||.:.||........
 Worm    23 VTTSWGMVRG-EVVSPEGDD---------------LPPVAQYLGIPYGVAPTGQYRFNMAISAAK 71

  Fly   202 WQLL--QAVDFGPACPQ-------------PVRYTGATK---------GIMDMDEDCLYLNVYSP 242
            |..:  .|....|.|.|             ..::|.|.:         .:....|||||:|:|.|
 Worm    72 WTHMPKDARKVSPVCIQTDMPELSETKRFRAFKHTSAQRFDFNHRLLPHLKKQSEDCLYMNIYVP 136

  Fly   243 KTGAGVAQKY-PVMVYIHGGEFIRGASNLFQGHILASFYDVVVVTLNYRLGALGFLSTGDENS-P 305
            :........| ||||.:||.|:..|..|.|.|..||::..::|||||||||..|||...:.:| .
 Worm   137 ERLEISRDNYLPVMVIVHGEEYGWGTGNAFNGTTLAAYGHIIVVTLNYRLGVFGFLGRCESSSCS 201

  Fly   306 GNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQT---RNIVRRVIAQSG 367
            ||.||.|...||..:...:..|.||..|:||.|.|:|.:...|||.:|.|   |.:.||.|...|
 Worm   202 GNSGISDLVSALTMLNVILPSFGGDSKSVTLAGWGSGASLVSLLMASPLTQPGRRLFRRAILLDG 266

  Fly   368 SALADWALIQD--KYRAQNTSRVLGQLLGCSIE---SSWK-----LVNCLRTGRSFYELGNAEFS 422
            |||:.||:.|:  :|..|     |.:.|.|:.:   ||:.     :|.|::. .|...:..|...
 Worm   267 SALSPWAISQNPQQYFMQ-----LAEELACAPKNRTSSFNDNVDTIVRCMQV-HSSENITKAVLK 325

  Fly   423 PQVGSFPWG--PVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGVTTQEA 485
            ..|.:|..|  |::|... :|        .:....|.||       .|...|.|..:.|:::..:
 Worm   326 IDVPTFLSGFAPIVDGQL-IP--------NKPQVSFSTQ-------YGSLFREIDLLVGISSNPS 374

  Fly   486 AFFVAQNESLSPYYELDGRFFDQKIREHVFRYNYTLNPNGVYEAIKYIYTFWPDPNNN-TIIRDQ 549
            ...:: ||.|......:.|   .:|...:.|..|..:...:..:|...||.|.:|.:: ..||:.
 Worm   375 HHMIS-NEDLKVGISKEKR---MRIFRSLVRNLYDFHREEILASIINEYTDWENPRDHPKSIRNG 435

  Fly   550 YINMLSDLYYRAPVDQMVKL----MLEQKVPVYMYVLNTTVEALNLPQW-RKYPHDIERYFLTG- 608
            .:|.|||:.|.||:.:.::.    .:.::...:|:..     |.....| ::.|:...|..|:| 
 Worm   436 VLNALSDVLYTAPLIETLRSHSADEVRKEANTFMFAF-----AHETRSWSQEQPNSGIRGSLSGD 495

  Fly   609 -APFM--------DTEFFPKKEHLQRNMWTDNDRNMSHFFMQTYTNFARYGNPTPQQVLGMHFQR 664
             .|::        |:|     |.|.....|| |:.:|...|...:||.:.|:|:....:..:|. 
 Worm   496 IVPYIFGYPLAQGDSE-----ERLYSGFNTD-DKGISKVMMHYVSNFVKSGDPSKPNPMSKNFP- 553

  Fly   665 AYQGEI---------------RYLNINTTYNSSILLNYRQTECAFWTQYLPTV---------IG- 704
              .|::               .||.|  |....:...||..:..||..::|.:         :| 
 Worm   554 --MGDVFHSTAWPQFDQPNREAYLEI--TDRPRVKNYYRNAQVGFWNNFIPQLHKNGKETEPVGE 614

  Fly   705 --------------------------------VLVPTYPPTTEYWWEPK------------EPLQ 725
                                            .:.|:.||  |...:||            |..:
 Worm   615 EHHLLSDHFRKDSYFGKTRHFSSYANLPFPPPPMPPSPPP--ELTTKPKPSESPTTLQTTTESEK 677

  Fly   726 IAFWSMS---------VACFFLIVLVVICCIM------WRNAKRQSDRF------YDEDVFINGE 769
            .|..|.:         :.|.|||:.|   |::      |...:|...:|      |:.:   :|.
 Worm   678 AAAGSFTGKALGGVIFIGCGFLIMNV---CLLIAVRREWGKKRRNEKKFQLQYQTYNSN---HGG 736

  Fly   770 GLE--------------PEQDTRGVDN---AHMV------TNHHALRSRDNIYEYRDSPSTKTLA 811
            |.|              |.....||.:   .|.|      :..|....|.:..|....|    |.
 Worm   737 GAEQYNSLNSPLSLMPPPPPPLNGVHDDIFDHRVPHLRNGSTVHGTLPRHSFQEQAREP----LL 797

  Fly   812 SKAHTDTTSLRSPSSLAMTQKSSSQASLKSGISLKETNGHLVKQSERAATPRSQQNGSTAKVASP 876
            |.:|.::||:| |:.::.|.....:|:|                    |...|:.|..||..| |
 Worm   798 SASHKNSTSMR-PAGISPTCPRHGRAAL--------------------ALQNSRGNSLTAAQA-P 840

  Fly   877 PVEE 880
            .:||
 Worm   841 TLEE 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 165/629 (26%)
nlg-1NP_001257226.1 COesterase 22..595 CDD:365897 165/629 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28602
OrthoDB 1 1.010 - - D80457at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR43903
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.030

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