DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and tg

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001316486.1 Gene:tg / 100492021 XenbaseID:XB-GENE-6073495 Length:2780 Species:Xenopus tropicalis


Alignment Length:571 Identity:159/571 - (27%)
Similarity:244/571 - (42%) Gaps:121/571 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 FLGIPYALPPTFEGRFKPPRVHRGWQLLQAVDFGPACPQPVRYTG---ATKG------------- 226
            |||||||.||....||.|                   ||||.:||   ||..             
 Frog  2244 FLGIPYAAPPVGVYRFSP-------------------PQPVNWTGEWNATYSRASCLQPGDGKAQ 2289

  Fly   227 IMDMDEDCLYLNVYSPK-TGAGVAQKYPVMVYIHG--GEFIRGASNLFQGHILASFYDVVVVTLN 288
            ...:.||||||||:.|: .|...|    |::|.|.  .::.........|..||:..::||||..
 Frog  2290 YSSVGEDCLYLNVFVPQHAGTNAA----VLLYFHNSPSDYSEKGQTFIDGSYLAAIGNIVVVTAG 2350

  Fly   289 YRLGALGFLSTGDENSP-GNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLMVA 352
            ||:|..||||...|.:| ||:|:|||..||:||.:||.:|.||...|::....||...:.:..:.
 Frog  2351 YRVGVFGFLSNTGETAPSGNWGLLDQVAALKWVQENIAYFGGDPTLISIAADRAGADISSIHTIV 2415

  Fly   353 PQTRNIVRRVIAQSGSALADWALIQDKYRAQNTSRVLGQLLGCSIESSWKLVNCLR-TGRSFYEL 416
            |:.: :.||.:...|||.:...:..:| ||:.....|...:.|| .|:..|:.||| ........
 Frog  2416 PEGK-LFRRALLMGGSAFSPMMVTSEK-RAKEQVEFLAAEVECS-SSNKDLLTCLRGVDAGALNA 2477

  Fly   417 GNAEFSPQVGSF-PWGPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGV 480
            ...:...|.|.| .|||::|.                  .::.:||..:::..||.: |..:.| 
 Frog  2478 AQTKLLAQRGPFQTWGPIVDK------------------LYVKETPSRMLKQKKFQK-IDLLIG- 2522

  Fly   481 TTQEAAFFVAQNESLSPYYELDGRFFDQKIREHVFRYNYTLNPNG-------VYEAIKYIYTFWP 538
             :.|....:::.:::..:.|..||     :.:..| |....|..|       :.||..:.|:...
 Frog  2523 -SSELDGLISRAKAIKRFEETQGR-----VDKTAF-YQALQNSLGGVEANSLLQEAAVWFYSLEH 2580

  Fly   539 DPNNNTIIRDQYINMLSDLYYRAPVDQMVKLMLE-QKVPVYMY----VLNTTVEALNLPQWRKYP 598
            ..::.|...........|.:...||.:|.|...| .|..:|:|    .|:.:...|:||:     
 Frog  2581 SSDDYTGFSKALEKATRDHFIACPVIKMAKHWAENSKGNIYLYHVPDTLSQSSSGLDLPE----- 2640

  Fly   599 HDIERYFLTGAPFMDTEFFPKKEHLQRNMWTDNDRNMSHFFMQTYTNFARYGNPT-PQQVLGMHF 662
             |:.|.|  |.|| .|.:        :|.::..::.:|...||..:||.|.|||. |.:     |
 Frog  2641 -DVIRAF--GLPF-HTNY--------KNQFSSEEQILSLKIMQYVSNFVRTGNPNFPYK-----F 2688

  Fly   663 QRAYQGEI----RYL--NINTTYN--SSILLN---YRQTECAFWTQYLPTV 702
            .|....|:    .||  :..|.|.  ||.|.|   .:.:||:||..|:||:
 Frog  2689 LRRISKELPAWPMYLAHSNGTNYKEFSSSLTNNQGLKNSECSFWNDYIPTL 2739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 154/562 (27%)
tgNP_001316486.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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