DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and nlgn1

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_017949302.2 Gene:nlgn1 / 100329186 XenbaseID:XB-GENE-6041753 Length:859 Species:Xenopus tropicalis


Alignment Length:828 Identity:233/828 - (28%)
Similarity:351/828 - (42%) Gaps:178/828 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 QRRDSLTLERDVFVTTNYGQVQGFKVYMYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPT 188
            |:.|.:    |..|.|.||:|:|||..:.                :.::|....|||:|||.||.
 Frog    46 QKLDDV----DPVVLTTYGKVRGFKKELN----------------NEILGPVVQFLGVPYAAPPI 90

  Fly   189 FEGRFKPPRVHRGW-QLLQAVDFGPACPQ------------PVRYTG----ATKGIMDMDEDCLY 236
            .|.||:||.....| .:..:..|.|.|||            ||.:|.    .:..:.|..|||||
 Frog    91 GERRFQPPEPPTMWGDIKNSTQFAPVCPQNIVGGRLPEVMLPVWFTNNLDVVSSYVQDQSEDCLY 155

  Fly   237 LNVYSP-------------KTGAGVAQK-----------------------------YPVMVYIH 259
            ||:|.|             |.|..:.:|                             .|||||||
 Frog   156 LNIYVPTEDVKRISKECARKPGKKICRKEGPLTKKQTDDLGDNEGAEDEDIRDSGGPKPVMVYIH 220

  Fly   260 GGEFIRGASNLFQGHILASFYDVVVVTLNYRLGALGFLSTGDENSPGNYGILDQAMALRWVYDNI 324
            ||.::.|..|:|.|.:|||:.:|:|:|:|||||.||||||||:.|.||||:||...||||..:||
 Frog   221 GGSYMEGTGNVFDGSVLASYGNVIVITVNYRLGVLGFLSTGDQASKGNYGLLDLIQALRWTSENI 285

  Fly   325 EFFNGDRNSITLFGPGAGGASAGLLMV---------APQTRNIVRRVIAQSGSALADWALIQDKY 380
            .||.||...||:||.|||.:...||.:         :..|:.:.:|.|||||:||:.||:   .:
 Frog   286 GFFGGDPLRITVFGSGAGASCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAV---SF 347

  Fly   381 RAQNTSRVLGQLLGCSIESSWKLVNCLRTGRSFYELGNAEFSPQVGSFPWGPVLDHNFTLPGDDW 445
            :....:|:|...:||::..|.:||.||:. :.:.||.:.:..|......:|||:|.: .:|.|  
 Frog   348 QPAKYARILATKVGCNMSDSGELVECLQK-KPYRELVDQDIQPVRYHIAFGPVIDGD-VIPDD-- 408

  Fly   446 YEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGVTTQEAAFFVAQNESLSPYYE-LDGRFFDQK 509
                           |:.|:..|:| .|...|.||...|...||   ||...:.: :....||..
 Frog   409 ---------------PQVLMEQGEF-LNYDIMLGVNQGEGLKFV---ESTVDHEDGVSSSDFDFA 454

  Fly   510 IREHVFR-YNYTLNPNGVYEAIKYIYTFWPDPNNNTIIRDQYINMLSDLYYRAPVDQMVKLMLEQ 573
            :...|.. |.||...:.:.|.||::||.|.|.||....|...:.:.:|..:.||......|....
 Frog   455 VSNFVDNLYGYTEGKDILRETIKFMYTDWADRNNPETRRKTLLALFTDHQWVAPAVATADLHSNF 519

  Fly   574 KVPVYMYVLNTTVEALNLPQWRKYPHDIERYFLTGAPFM-DTEFFPKKEHLQRNMWTDNDRNMSH 637
            ..|.|.|......:...:|.|....|..|..::.|.|.: .||.||..       ::.||..:|.
 Frog   520 GSPTYFYAFYHHCQTDQVPAWADASHGDEIPYVFGIPMIGPTELFPCN-------FSKNDVMLSA 577

  Fly   638 FFMQTYTNFARYGN---PTPQQVLGMH----------FQRAYQGEIRYLNINTTYNSSILLNYRQ 689
            ..|..:||||:.|:   |.||....:|          :.|..|.:..||:|.  ....:..:||.
 Frog   578 VVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYSQKDQLYLHIG--LKPRVKEHYRA 640

  Fly   690 TECAFWTQYLPT--VIGVLVPTYPPTTEYWWEP----KEPLQIAFWSMS---------------- 732
            |:...|.:.:|.  |:..|..|..|:|:...:|    ..|:..||.::|                
 Frog   641 TKVNLWLELVPRLHVMNDLTTTKGPSTDITSKPTGSNTVPVTSAFPTVSEDNFKQKPSSISLERD 705

  Fly   733 ------------VACFFLIVLVVICCIMWRNAKRQSD---RFYDEDVFINGEGLEPEQDTRGVDN 782
                        .:..||.:| ....:.::..||:.|   |...:....|......|::...:..
 Frog   706 YSTELSVTIAVGASLLFLNIL-AFAALYYKKDKRRHDVHRRCSPQRTTANDIAHAQEEEIMSLQM 769

  Fly   783 AHMVTNHHALRSRDNIYEYRDS-PSTKTLASKAHTDTTSLRSPSSLAM 829
            .|...:|.......:....|:: |...|||.:...|...|.:|:::.|
 Frog   770 KHTDLDHECESIHPHEVVLRNACPPDYTLAMRRSPDDIPLMTPNTITM 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 199/644 (31%)
nlgn1XP_017949302.2 COesterase 52..646 CDD:395084 199/644 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D80457at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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