DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and bchel

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_002937472.3 Gene:bchel / 100135377 XenbaseID:XB-GENE-5842192 Length:559 Species:Xenopus tropicalis


Alignment Length:600 Identity:163/600 - (27%)
Similarity:261/600 - (43%) Gaps:111/600 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 VTTNYGQVQGFKVYMYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFKPPRVHRG 201
            |....|:|.|.      |...||             |..:.:|||||..|||...|||.....:.
 Frog    34 VEVKQGKVSGI------NLSVKS-------------GYVTAYLGIPYGEPPTGRLRFKKTEQRKP 79

  Fly   202 WQ-LLQAVDFGPACPQP-----VRYTGATKGIM--DMDEDCLYLNVYSPKTGAGVAQKYPVMVYI 258
            |. :|:|..||.:|.|.     ..:.|....::  :|.||||:|||:.|.:....|.   |||:|
 Frog    80 WHGVLKADKFGKSCFQNRENKFAEFPGTEMFLVNNEMSEDCLHLNVWVPPSKPKDAH---VMVFI 141

  Fly   259 HGGEFIRGASNL--FQGHILASFYDVVVVTLNYRLGALGFLS-TGDENSPGNYGILDQAMALRWV 320
            |||.|..|.::|  :.|.:||...:|:||::|||:||.|||: .|.:::|||.|:.||.:||:|:
 Frog   142 HGGGFESGTTSLDIYDGSVLAYAENVIVVSMNYRVGAFGFLALPGHKDAPGNAGLFDQRLALQWI 206

  Fly   321 YDNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQTRNIVRRVIAQSGSALADWALIQDKYRAQNT 385
            .:||..|.|:.:.:|:||..||.||.|..:::|::.....|.|.||||..::|||..:: ||:..
 Frog   207 NENIAAFGGNPDRVTIFGHSAGAASVGFHLISPKSYPYYNRAIVQSGSGTSNWALNSEE-RAKRL 270

  Fly   386 SRVLGQLLGCSIESSWKLVNCLRT------------GRSFYELGNAEFSPQVGSFPWGPVLDHNF 438
            :..|.::|.|.......::.||..            .:..|.|  .:|.         |::||: 
 Frog   271 ALKLAEVLECPQTDDDAIITCLLNEDPKHLTEKQLLAKEPYAL--TQFL---------PIVDHD- 323

  Fly   439 TLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGVTTQE--------AAFFVAQNESL 495
                             ||...||.::  |:..:....:.|:|..:        :..|..|.||.
 Frog   324 -----------------FLVDVPENVL--GQSMKRTDILLGITKDDGNPFTLIGSTDFNIQTESS 369

  Fly   496 SPYYELDGRFFDQKIREHVFRYNYTLNPNGVYEAIKYIYTFWPDPNNNTIIRDQYINMLSDLYYR 560
            ....||         .|.:.|:..:....|: ::|...|..|.|.||....|.....:|.|.|:.
 Frog   370 ISSAEL---------LERLKRFFPSAGDLGI-QSILLQYKDWEDVNNGEKNRQAMELILRDYYFA 424

  Fly   561 APVDQMVKLMLEQKVPVYMYVLNTTVEALNLPQWRKYPHDIERYFLTGAPFMDTEFFPKKEHLQR 625
            .||....:..:|.:..|:.|..:........|:|....|..|...|.|.||           :.:
 Frog   425 CPVKGFARYAVEHQNNVFFYEYDHRSSNDPWPEWMGALHGAELPMLFGKPF-----------INK 478

  Fly   626 NMWTDNDRNMSHFFMQTYTNFARYGNPTPQQVLGMHFQRAYQGEIRY--LNINTTYNSSILLNYR 688
            ..:|.::...|...|:.:.||||.|:|..:...|..:.:....:.:|  |.:|   .|.:.....
 Frog   479 GRYTRSELLFSKRIMKLWANFARTGSPNVEAEDGFVWPQYSLKDEKYAVLKLN---GSEVHQMLS 540

  Fly   689 QTECAFWTQYLPTVI 703
            ...|.||..:.|:::
 Frog   541 MRNCQFWNFFFPSLL 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 160/590 (27%)
bchelXP_002937472.3 COesterase 31..547 CDD:395084 160/590 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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