DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and nlgn1

DIOPT Version :9

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_017213657.1 Gene:nlgn1 / 100002610 ZFINID:ZDB-GENE-090918-1 Length:867 Species:Danio rerio


Alignment Length:888 Identity:233/888 - (26%)
Similarity:363/888 - (40%) Gaps:222/888 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 ERDVFVTTNYGQVQGFKVYMYDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFKPP 196
            |.|..|||.||:|:|||..:.                :.::|....|||:|||.|||.|.||:||
Zfish    51 ETDPIVTTTYGKVRGFKKELN----------------NEILGPVIQFLGVPYAAPPTGERRFQPP 99

  Fly   197 RVHRGW-QLLQAVDFGPACPQ------------PVRYTGA----TKGIMDMDEDCLYLNVYSP-- 242
            .....| ::..|..|.|.|||            ||.:|.:    :..:.|..||||:||:|.|  
Zfish   100 EPPISWSEIRNATQFAPVCPQTLLEGRLPDVMLPVWFTNSIEVVSSYVQDQSEDCLFLNIYVPTE 164

  Fly   243 -----------KTGAGVAQK-----------------------------YPVMVYIHGGEFIRGA 267
                       |.|..:.:|                             .||||::|||.::.|.
Zfish   165 DVKRISKECARKPGKKICRKGGPLSKKQNDDLADNDGAEDEDIRESGSPKPVMVFVHGGSYMEGT 229

  Fly   268 SNLFQGHILASFYDVVVVTLNYRLGALGFLSTGDENSPGNYGILDQAMALRWVYDNIEFFNGDRN 332
            .|:|.|.||||:.:|:|:|:|||||.||||||||:.:.||||:||...||||..:||.||.||..
Zfish   230 GNMFDGSILASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIAFFGGDPL 294

  Fly   333 SITLFGPGAGGASAGLLMV---------APQTRNIVRRVIAQSGSALADWALIQDKYRAQNTSRV 388
            .||:||.|||.:...||.:         :..|:.:.:|.|||||:||:.||:   .::....:|:
Zfish   295 RITVFGSGAGASCVNLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAV---SFQPAKYARM 356

  Fly   389 LGQLLGCSIESSWKLVNCLRTGRSFYELGNAEFSPQVGSFPWGPVLDHNFTLPGDDWYEGWREKD 453
            |.:.:||:::.:.::|.||:. :.:.||...:..|......:|||:|.: .:|.|          
Zfish   357 LAKKVGCNLKDTVEMVECLQK-KHYKELVEQDIQPARYHIAFGPVIDGD-VIPDD---------- 409

  Fly   454 WRFLTQTPETLIRAGKFNRNIQYMTGVTTQEAAFFV---AQNESLSPYYELDGRFFDQKIREHV- 514
                   |:.|:..|:| .|...|.||...|...||   ..||:     .:....||..:...| 
Zfish   410 -------PQILMEQGEF-LNYDIMLGVNQGEGLKFVELIVDNEN-----GVQANDFDYAVSSFVD 461

  Fly   515 FRYNYTLNPNGVYEAIKYIYTFWPDPNNNTIIRDQYINMLSDLYYRAPVDQMVKLMLEQKVPVYM 579
            ..|.|....:.:.|.||::||.|.|.:|....|...:.:.:|..:.||......|......|.|.
Zfish   462 DLYGYPEGKDILRETIKFMYTDWADRHNPETRRKTLLALFTDHQWVAPAVATADLHSSFGSPTYF 526

  Fly   580 YVLNTTVEALNLPQWRKYPHDIERYFLTGAPFM-DTEFFPKKEHLQRNMWTDNDRNMSHFFMQTY 643
            |......:...:|.|....|..|..::.|.|.: .||.||..       ::.||..:|...|..:
Zfish   527 YAFYHHCQTEQVPPWADAAHGDEIPYVFGLPMIGPTELFPCN-------FSKNDVMLSAVVMTYW 584

  Fly   644 TNFARYGN---PTPQQVLGMH----------FQRAYQGEIRYLNINTTYNSSILLNYRQTECAFW 695
            ||||:.|:   |.||....:|          :.|..|.:..||:|.  ....:..:||..:...|
Zfish   585 TNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWTRYNQKDQLYLHIG--LKPRVKEHYRANKVNLW 647

  Fly   696 TQYLP------TVIGVLVPTYPPTTEYWWEPKEPLQIAF-------------------------- 728
            .:.:|      .|..::..|..|..|.  .|:.|.:|..                          
Zfish   648 LELVPHLHSLNEVSQIISTTKLPPPEV--TPRTPKKIPVNTKRPYPTPFPTETQDSHNQNQNQPF 710

  Fly   729 ----------WSMSVA----CFFLIVLVVICCIMWRNAKRQSD----------------RFYDED 763
                      .|:::|    ..||.:| ....:.::..||:.:                ...:|:
Zfish   711 LVDQRDYSTELSVTIAVGASLLFLNIL-AFAALYYKKDKRRHEVHRRCSPQRTTANELPHTQEEE 774

  Fly   764 VF-INGEGLEPEQDTRGVDNAHMVTNHHALRSRDNIYEYRDSPSTKTLASKAHTDTTSLRSPSSL 827
            :. :..:..:.|::.|...:.|.|    .||:.        .|...|||.:...|...|.:|:::
Zfish   775 IMSLQMKHSDLERECREAMHPHEV----VLRTA--------CPPDYTLAMRRSPDDIPLMTPNTI 827

  Fly   828 AMTQKSSSQASLKSGISLKETNGHLVKQSERAATPRSQQNGST 870
            .|...     |:....||...|.:...|:.....|....:.:|
Zfish   828 TMIPN-----SMPGLTSLHPFNSYSSGQNNTLPHPHPHSHSTT 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 134..695 CDD:278561 194/646 (30%)
nlgn1XP_017213657.1 COesterase 53..647 CDD:306613 194/646 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D80457at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43903
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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