DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-B17 and ndufb6

DIOPT Version :10

Sequence 1:NP_609765.1 Gene:ND-B17 / 34925 FlyBaseID:FBgn0001989 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_001016490.1 Gene:ndufb6 / 549244 XenbaseID:XB-GENE-5862025 Length:128 Species:Xenopus tropicalis


Alignment Length:139 Identity:36/139 - (25%)
Similarity:58/139 - (41%) Gaps:33/139 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GMSPEE-------RAWRKQWLKDQELHHGPRKVPALELELNNPIKRFYRAPLDKVCNVLEPVLGF 87
            |.:|:|       |..|::|||||||  .||: |.|......|::.|:...|.|        ...
 Frog     3 GYTPDEKLRLEQLRTLRRRWLKDQEL--SPRE-PVLPPAKKGPVENFWGNFLQK--------KNL 56

  Fly    88 QRAYTVRFWTGKALLALTGIYAGA----YYFKYNQNDWTRKGGWRVIHSRKQCVPGD------EG 142
            .|.||.:.:.. .:..||.:...|    ||.||:    .:...:.:::.:.:..|||      |.
 Frog    57 WRIYTFKAYNA-GVFTLTRLLIPAWIVHYYMKYH----VQTKPYAIVNLKPRLFPGDTILETGEV 116

  Fly   143 YPKVSDRSA 151
            .|.:...|:
 Frog   117 IPPIEKTSS 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-B17NP_609765.1 NDUF_B6 11..160 CDD:462896 36/139 (26%)
ndufb6NP_001016490.1 NDUF_B6 3..128 CDD:462896 36/139 (26%)

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