DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ND-B17 and ndufb6

DIOPT Version :9

Sequence 1:NP_609765.1 Gene:ND-B17 / 34925 FlyBaseID:FBgn0001989 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_957102.1 Gene:ndufb6 / 393781 ZFINID:ZDB-GENE-040426-1781 Length:128 Species:Danio rerio


Alignment Length:121 Identity:33/121 - (27%)
Similarity:54/121 - (44%) Gaps:25/121 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GMSPEER-------AWRKQWLKDQELHHGPRKVPALELELNNPIKRFYRAPLDKVCNVLEPVLGF 87
            |.:|:::       ..|:||||||||  .||: |.:.......|:||:       ...|||.. .
Zfish     3 GYTPDQKLRFEQLVKLRRQWLKDQEL--SPRE-PVVAPSTPGRIERFW-------TRFLEPKT-L 56

  Fly    88 QRAYTVR-FWTGKALLALTGIYAGA--YYFKYNQNDWTRKGGWRVIHSRKQCVPGD 140
            .|.||.: ::.|...|.:..:.|..  ||.||:.::..    :.:...:.:..|||
Zfish    57 WRLYTYKAYFAGVTTLKVVLLPAWVLHYYLKYHVSETP----FAISAQKPKLFPGD 108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-B17NP_609765.1 NDUF_B6 9..160 CDD:286822 33/121 (27%)
ndufb6NP_957102.1 NDUF_B6 1..128 CDD:286822 33/121 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4633
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.