DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycE and CLB4

DIOPT Version :9

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_013311.1 Gene:CLB4 / 850907 SGDID:S000004200 Length:460 Species:Saccharomyces cerevisiae


Alignment Length:462 Identity:104/462 - (22%)
Similarity:188/462 - (40%) Gaps:121/462 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 KRQQRLPALYGSEQGNLSSVASSVYTSPVVSVDGQSTQ--ELLSIRSSP--AEDLSEAPHSP--- 191
            |||:|: ||     |:::|..::...:.:.:...|:..  |:.:||||.  .|...:..|..   
Yeast    47 KRQRRV-AL-----GDVTSQKANKIHNAIHNKFHQTKNNFEIENIRSSALVKEQQRDVRHEDSDY 105

  Fly   192 -LPDSPDSPPSPDRGSKQTPVVVRYAAEQVVTSTVVTQKTEDDDLLDDSCEDYSYDEDDEDDVEE 255
             |.||.:...:.|....:.      |.:.:::..|..|:.:.|::.:|      :|.:.:|.:||
Yeast   106 FLIDSSEGSSTDDEQVNED------AIDDLLSRRVNDQQIQADEVYED------FDGEMQDVIEE 158

  Fly   256 EDDDVEIYSSTISPASSGCSQQQAVNGERTPGLPKHQEQIHHPVSDLMINMRTPMSPAVENGLRQ 320
            :.|      |.|.|.|                 |.:.::|           :|.:..|.|...|.
Yeast   159 DVD------SQIEPLS-----------------PINNDEI-----------QTELDRAFEKYFRS 189

  Fly   321 CPLP--------ALAWANAADVWRLMCHRDEQDSRLRSISM--------LEQHPGLQPRMRAILL 369
            .|.|        .:....|:|::..          ||.:.:        ::....|....|..::
Yeast   190 VPNPLDDDTHDVVMVVEYASDIFYY----------LRELEVKYRPNPYYMQNQVELTWPFRRTMI 244

  Fly   370 DWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFA 434
            |||:::...::|..||.||.::.:||:|. ...|.....||:|::.||:|||.|||..|.:.:..
Yeast   245 DWLVQLHFRFQLLPETLYLTINIVDRFLS-KKTVTLNRFQLVGVSALFIAAKFEEINCPTLDDLV 308

  Fly   435 YVTDGACTERDILNHEKILLQALDWDISPITITGWLGVYMQLNVNNRTPASFSQIGRQKSAEADD 499
            |:.:...|..||:..|:.::..|:::|      ||.|           |..|    .::.::|||
Yeast   309 YMLENTYTRDDIIRAEQYMIDTLEFEI------GWPG-----------PMPF----LRRISKADD 352

  Fly   500 AFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAA--ISHTF--SREMALR---CSGLDW 557
            ....|:      .....||:...::..:...:.|.|||.|  :|.|.  |.:.:|:   .||...
Yeast   353 YDFEPR------TLAKYLLETTIVEPKLVAAAPSWLAAGAYFLSRTILGSNDWSLKHVFYSGYTS 411

  Fly   558 QVIQPCA 564
            ..|.|.|
Yeast   412 SQIIPLA 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 35/136 (26%)
Cyclin_C <517..>571 CDD:281044 16/55 (29%)
CLB4NP_013311.1 COG5024 10..459 CDD:227357 104/462 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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