DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and CYCA1;1

DIOPT Version :10

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_175077.1 Gene:CYCA1;1 / 841014 AraportID:AT1G44110 Length:460 Species:Arabidopsis thaliana


Alignment Length:46 Identity:10/46 - (21%)
Similarity:15/46 - (32%) Gaps:6/46 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PMFVIGDNSEIRAKLSQLIVEPKVQFESWSDCVNYWMPQTEAAKLS 87
            |.|............|.:.|||.      .:.:..|:|.....|:|
plant   152 PRFPFNRGKRPAPSFSDIGVEPP------DEHIPVWLPAFPETKMS 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 CYCLIN_CCNE_rpt1 327..459 CDD:410223
CYCLIN_CCNE_rpt2 463..576 CDD:410224
CYCA1;1NP_175077.1 CYCLIN_AtCycA_like_rpt1 187..322 CDD:410265 2/5 (40%)
CYCLIN_AtCycA-like_rpt2 326..440 CDD:410210
Blue background indicates that the domain is not in the aligned region.

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