DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and CYCB1;5

DIOPT Version :9

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_001320187.1 Gene:CYCB1;5 / 840348 AraportID:AT1G34460 Length:498 Species:Arabidopsis thaliana


Alignment Length:464 Identity:93/464 - (20%)
Similarity:163/464 - (35%) Gaps:181/464 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ELPGTSAASRTDEMCSCDSQNLAASTAATSNGNKRKRRLSSDSNEDPELGFEPPSAKRQQRLPAL 142
            :||..:..|...|:.....|:....||.....:::||.:.|.|                  :.::
plant    55 DLPDDNRLSPLTELEDIGQQSKTLGTAIHRKISEQKRVIESGS------------------VASI 101

  Fly   143 YGSEQGNLSSVASS-------VYTSPVVSVDGQSTQ----------------ELLSI------RS 178
            ...::.|||::.::       |..:|:  |||...|                .|:|:      ::
plant   102 VEHKRTNLSAIMATRANIPEQVRGAPL--VDGLKIQNKNGAVKNRRALGDIGNLVSVPGVQGGKA 164

  Fly   179 SP-----------AEDLSEAPHSPLPDSPDSPPSPDRGSKQTPVVVRY-AAEQVV--TSTVVTQK 229
            .|           |:.|:.|.....|.:.|: ..|..|.|..|:..|. .|::.|  .:.||.|:
plant   165 QPPINRPITLSFRAQLLANAQLERKPINGDN-KVPALGPKSQPLAARNPEAQRAVQKKNLVVKQQ 228

  Fly   230 TEDDDLLDDSCEDYS--------------YDEDDEDD----VEEEDDDVEIYSSTISPASSGCSQ 276
            |:..::::......|              .||.|:|:    ||..||....|             
plant   229 TKPVEVIETKRNAQSKAACGIVNKPKILDIDESDKDNHVAAVEYVDDMYSFY------------- 280

  Fly   277 QQAVNGERTPGLPKHQEQIHHPVSDLMINMRTPMSPAVENGLRQCPLPALAWANAADVWRLMCHR 341
             :.|..|..|.:..|              ::|.|:                              
plant   281 -KEVEKESQPKMYMH--------------IQTEMN------------------------------ 300

  Fly   342 DEQDSRLRSISMLEQHPGLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKT 406
                                .:|||||:|||:||...::|:.||.||.|:.:||:|:| ..|.|.
plant   301 --------------------EKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLYV-KAVPKR 344

  Fly   407 HLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDILNHEKILLQALDWDISPITITGWLG 471
            .||                    :.:..||||.|.:.|.||..:|.:|..|:|.::..|...:|.
plant   345 ELQ--------------------VNDLVYVTDNAYSSRQILVMKKAILGNLEWYLTIPTQYVFLF 389

  Fly   472 VYMQLNVNN 480
            .:::.::::
plant   390 CFIKASISD 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 36/128 (28%)
Cyclin_C <517..>571 CDD:281044
CYCB1;5NP_001320187.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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