DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and CYCB2;3

DIOPT Version :9

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_173485.1 Gene:CYCB2;3 / 838650 AraportID:AT1G20610 Length:429 Species:Arabidopsis thaliana


Alignment Length:468 Identity:110/468 - (23%)
Similarity:192/468 - (41%) Gaps:118/468 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 SEQGNLSSVAS-SVYTSPVV------SVDGQSTQELLSIRSSPAEDLSEAPHSPLPDSPDSPPSP 202
            |::.:|..:.| |:....||      :..|.:.:.|.:|.    ::::|||..|...:..|....
plant     4 SDENSLGLIGSMSLQGGGVVGKIKTTATTGPTRRALSTIN----KNITEAPSYPYAVNKRSVSER 64

  Fly   203 D----RGSKQTPVVVRYAAEQVVTSTVVTQKTEDDDLLDDSCEDYSYDEDDE--DDVEEEDDDVE 261
            |    :.....||..::||:                |.|.  :.:..||:.:  |.|..|:.:..
plant    65 DGICNKPPVHRPVTRKFAAQ----------------LADH--KPHIRDEETKKPDSVSSEEPETI 111

  Fly   262 IYSSTISPASSGCSQQQAVNGERTPGLPKHQEQIHHPVSDL-----MINMRTPMSPAVENGLRQC 321
            |.....|....|.|.:        |...:|.|.:...:..:     |.:......|.::  :..|
plant   112 IIDVDESDKEGGDSNE--------PMFVQHTEAMLEEIEQMEKEIEMEDADKEEEPVID--IDAC 166

  Fly   322 ----PLPALAWANAADVW-----RLMC----HRDEQDSRLRSISMLEQHPGLQPRMRAILLDWLI 373
                ||.|:.:.:....:     :|.|    :.|.|..             |..|||.||:||||
plant   167 DKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYMDNQQD-------------LNERMRGILIDWLI 218

  Fly   374 EVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTD 438
            ||...::|..||.||.::.:||:|.| |::.:..|||:|:|.|.:|.|.||:..|.:.:...::|
plant   219 EVHYKFELMEETLYLTINVIDRFLAV-HQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILISD 282

  Fly   439 GACTERDILNHEKILLQALDWDISPITITGWLGVYMQLNVNNRTPASFSQIGRQKSAEADDAFIY 503
            .|.:.|::|:.||::...|                 |.|.:..||..|.: ...|:|::|.....
plant   283 KAYSRREVLDMEKLMANTL-----------------QFNFSLPTPYVFMK-RFLKAAQSDKKLEI 329

  Fly   504 PQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAAISHTFSREMALR--------C---SGLDW 557
            ..|.         :::||.::..|..|..|.|||:||   ::.:..|:        |   :|.:.
plant   330 LSFF---------MIELCLVEYEMLEYLPSKLAASAI---YTAQCTLKGFEEWSKTCEFHTGYNE 382

  Fly   558 QVIQPCARWMEPF 570
            :.:..|||.|..|
plant   383 KQLLACARKMVAF 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 44/137 (32%)
Cyclin_C <517..>571 CDD:281044 18/65 (28%)
CYCB2;3NP_173485.1 Cyclin_N 180..304 CDD:278560 45/154 (29%)
Cyclin_C 308..425 CDD:281044 25/101 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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