Protein Alignment CycE and CYC3B

DIOPT Version :10

• Sequence 1: NP_001246037.1
• Gene: CycE / 34924
• FlyBaseID: FBgn0010382
• Length: 712
• Species: Drosophila melanogaster
• Sequence 2: NP_568248.2
• Gene: CYC3B / 831001
• AraportID: AT5G11300
• Length: 436
• Species: Arabidopsis thaliana
• Alignment Length: 287
• Identity: 73/287 - (25%)
• Similarity: 135/287 - (47%)
• Gaps: 78/287 - (27%)

  Fly   301 DLMINMRTPMSPAVENGLRQCPLPALAWANAADVWRLMCHRDEQ--------------------D 345
            |::::|.|..|...|:      |..:..|.|.|| .|...:||:                    |
plant   103 DILVDMHTEKSKLAED------LSKIRMAEAQDV-SLSNFKDEEITEQQEDGSGVMELLQVVDID 160

  Fly   346 SRLRS----------------ISMLEQHP----------GLQPRMRAILLDWLIEVCEVYKLHRE 384
            |.:..                ::.|:|.|          .:.|.||.||:|||:||.:.|||..:
plant   161 SNVEDPQCCSLYAADIYDNIHVAELQQRPLANYMELVQRDIDPDMRKILIDWLVEVSDDYKLVPD 225

  Fly   385 TFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDILNH 449
            |.||.|:.:||:|..:: :::..|||:|::|:.:|:|.||:..|.:.||.::|....|..::|:.
plant   226 TLYLTVNLIDRFLSNSY-IERQRLQLLGVSCMLIASKYEELSAPGVEEFCFITANTYTRPEVLSM 289

  Fly   450 EKILLQALDWDISPITITGWLGVYMQLNVNNRTPASFSQIGR-QKSAEADDAFIYPQFSGFEFVQ 513
            |   :|.|::            |:.:|:|    |.:.:.:.| .|:|:|  ::..| |...|::
plant   290 E---IQILNF------------VHFRLSV----PTTKTFLRRFIKAAQA--SYKVP-FIELEYL- 331

  Fly   514 TSQLLDLCTLDVGMANYSYSVLAAAAI 540
            .:.|.:|..::.....:..|::||:|:
plant   332 ANYLAELTLVEYSFLRFLPSLIAASAV 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycE	NP_001246037.1	CYCLIN_CCNE_rpt1	327..459	CDD:410223	50/177 (28%)
		CYCLIN_CCNE_rpt2	463..576	CDD:410224	17/79 (22%)
CYC3B	NP_568248.2	CYCLIN_AtCycA_like_rpt1	165..300	CDD:410265	42/150 (28%)
		CYCLIN_AtCycA-like_rpt2	304..418	CDD:410210	14/59 (24%)