DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and CYC1BAT

DIOPT Version :9

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_196233.1 Gene:CYC1BAT / 830502 AraportID:AT5G06150 Length:445 Species:Arabidopsis thaliana


Alignment Length:419 Identity:108/419 - (25%)
Similarity:174/419 - (41%) Gaps:103/419 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 GNLSSVASSVYTSPVVSVDGQSTQELLS---IRSSPAEDLSEAPHSPLPDSPDSPPSPDRGSKQT 209
            |||.||.         .|.|...|..::   .||..|:.|:.|.....|.:.|: ..|..|.|:.
plant    39 GNLVSVP---------GVQGGKAQPPINRPITRSFRAQLLANAQLERKPINGDN-KVPALGPKRQ 93

  Fly   210 PVVVRY-AAEQVV--TSTVVTQKTEDDDLLDDSCEDYSYDEDDEDDVEEEDDDVEI-YSSTISPA 270
            |:..|. .|::.|  .:.||.|:|:..::::      :..|..:.:|.....:.:: |||.:|..
plant    94 PLAARNPEAQRAVQKKNLVVKQQTKPVEVIE------TKKEVTKKEVAMSPKNKKVTYSSVLSAR 152

  Fly   271 S-SGCSQQQAVNGERTPGLPKHQEQIHHPVSDLMINMRTPMSPAVENGLRQCPLPALAWANAADV 334
            | :.|.   .||..:...:.:..:..|                             ||.....|.
plant   153 SKAACG---IVNKPKIIDIDESDKDNH-----------------------------LAAVEYVDD 185

  Fly   335 WRLMCHRDEQDSRLRSISMLEQHPGLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHV 399
            ........|::|:.:....::..  :..:|||||:|||:||...::|:.||.||.|:.:||:|.|
plant   186 MYSFYKEVEKESQPKMYMHIQTE--MNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLSV 248

  Fly   400 AHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDILNHEKILLQALDWDISPI 464
             ..|.|..|||:||:.|.:|:|.|||:||::.:..||||.|.:.|.||..||.:|..|:|.::  
plant   249 -KAVPKRELQLVGISALLIASKYEEIWPPQVNDLVYVTDNAYSSRQILVMEKAILGNLEWYLT-- 310

  Fly   465 TITGWLGVYMQLNVNNRTPASFSQIGRQKSAEADDAFIYPQFSGFEFVQTSQLLDLCTLDVGMAN 529
                             .|..:..:.|         ||....|..|.......|    .::||.:
plant   311 -----------------VPTQYVFLVR---------FIKASMSDPEMENMVHFL----AELGMMH 345

  Fly   530 YSY-----SVLAAAAISHTFSREMALRCS 553
            |..     |:|||:|:       ...|||
plant   346 YDTLTFCPSMLAASAV-------YTARCS 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 51/128 (40%)
Cyclin_C <517..>571 CDD:281044 12/42 (29%)
CYC1BATNP_196233.1 CYCLIN_AtCycB-like_rpt1 162..307 CDD:410270 53/176 (30%)
CYCLIN_AtCycB-like_rpt2 312..428 CDD:410215 18/76 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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