DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and CYCB1;3

DIOPT Version :9

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_187759.2 Gene:CYCB1;3 / 820325 AraportID:AT3G11520 Length:414 Species:Arabidopsis thaliana


Alignment Length:535 Identity:111/535 - (20%)
Similarity:179/535 - (33%) Gaps:208/535 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 HPDPIPSTSFSSASQRSEEELPGTSAASRTDEMCSCDSQNLAASTAATSNGNKRKRRLSSDSNED 123
            ||.|:                       |.|.:   |.:|.||         |.:|.|....|.|
plant     8 HPQPV-----------------------RGDPI---DLKNAAA---------KNRRALGDIGNVD 37

  Fly   124 PELGFE-----PPSAK--RQQRLPALYGSEQGNLSSVASSVYTSPVVSVDG-QSTQELLSIRSSP 180
            ..:|.|     .|..:  |.|.|      |...:::.|:.  .:|:  :|| ...||::......
plant    38 SLIGVEGGKLNRPITRNFRAQLL------ENAQVAAAANK--KAPI--LDGVTKKQEVVRAVQKK 92

  Fly   181 AEDLSEAPHSPL------PDSPDSPPSPDRGSKQTPVVVRYAAEQVVTSTVVTQKTEDDDLLDDS 239
            |......|..|:      ||:.:...:.:...|.|...|..|..:..:.|:        |:    
plant    93 ARGDKREPSKPIEVIVISPDTNEVAKAKENKKKVTYSSVLDARSKAASKTL--------DI---- 145

  Fly   240 CEDYSYDEDDEDDVEEEDDDVEIYSSTISPASSGCSQQQAVNGERTPGLPKHQEQIHHPVSDLMI 304
              ||...|:|...||..:|....|...::              |..|.:..|.:           
plant   146 --DYVDKENDLAAVEYVEDMYIFYKEVVN--------------ESKPQMYMHTQ----------- 183

  Fly   305 NMRTPMSPAVENGLRQCPLPALAWANAADVWRLMCHRDEQDSRLRSISMLEQHPGLQPRMRAILL 369
                                                                 |.:..:||:||:
plant   184 -----------------------------------------------------PEIDEKMRSILI 195

  Fly   370 DWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFA 434
            |||:||...:.|..||.||.|:.:||:|.: ..|.:..|||:|::.|.:|:|.|||:||::.:..
plant   196 DWLVEVHVKFDLSPETLYLTVNIIDRFLSL-KTVPRRELQLVGVSALLIASKYEEIWPPQVNDLV 259

  Fly   435 YVTDGACTERDILNHEKILLQALDWDISPITITGWLGVYMQLNVNNRTPASFSQIGRQKSAEADD 499
            ||||.:...|.||..||.:|..|:|.::                   .|..:..:.|...|...|
plant   260 YVTDNSYNSRQILVMEKTILGNLEWYLT-------------------VPTQYVFLVRFIKASGSD 305

  Fly   500 AFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSY-----SVLAAAAI------------------S 541
                         |..:.|.....::|:.::..     |:|||:|:                  .
plant   306 -------------QKLENLVHFLAELGLMHHDSLMFCPSMLAASAVYTARCCLNKTPTWTDTLKF 357

  Fly   542 HT-FSREMALRCSGL 555
            || :|....:.||.|
plant   358 HTGYSESQLMDCSKL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 44/128 (34%)
Cyclin_C <517..>571 CDD:281044 13/63 (21%)
CYCB1;3NP_187759.2 Cyclin_N 162..287 CDD:278560 49/203 (24%)
Cyclin_C 289..406 CDD:281044 18/97 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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