DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycE and ccnd2b

DIOPT Version :10

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:XP_073802500.1 Gene:ccnd2b / 565038 ZFINID:ZDB-GENE-050420-354 Length:330 Species:Danio rerio


Alignment Length:251 Identity:59/251 - (23%)
Similarity:103/251 - (41%) Gaps:41/251 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 LQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEE 424
            :||.||.::..|::||||..|...:.|.||::||||:| .|...:|.:|||:|..|||:|:|::.
Zfish    85 IQPFMRKMVATWMLEVCEEEKCEDDVFPLAMNYLDRFL-AAVPTRKCYLQLLGAVCLFLASKLKA 148

  Fly   425 IYPPKIGEFAYVTDGACTERDILNHEKILLQALDWDISPITITGWLGVYMQLNVNNRTPASFSQI 489
            ..|....:....||.:.|.:.:|..|.::|..|.|:::.|                 ||..|.:.
Zfish   149 CQPLSARKLCMYTDNSITSQQLLEWELVVLSKLKWNLAAI-----------------TPLDFIEH 196

  Fly   490 GRQKSAEADDAFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAAISHTFS--------- 545
            ...|....:|.....:      ..|...:.||..|.....|..|::|...:.....         
Zfish   197 ILHKLPFHEDRLTLIR------KHTQTFIALCATDHSFTMYPPSMIATGCVGAAVCGLQSSQSNQ 255

  Fly   546 -------REMALRCSGLDWQVIQPCARWMEPFFR-VISQKAPYLQLNEQNEQVSNK 593
                   .|:..:.:..:...::.|...:|.... .:.:.....|..:|:.:.|||
Zfish   256 SLWGDNLMELLAKITNTELDCLKSCQEQIEQLLTDSLKESQQQHQQQQQDGRASNK 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 CYCLIN_CCNE_rpt1 327..459 CDD:410223 37/98 (38%)
CYCLIN_CCNE_rpt2 463..576 CDD:410224 16/129 (12%)
ccnd2bXP_073802500.1 None

Return to query results.
Submit another query.