DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycE and ccni

DIOPT Version :9

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_998386.1 Gene:ccni / 406239 ZFINID:ZDB-GENE-040426-2898 Length:355 Species:Danio rerio


Alignment Length:416 Identity:85/416 - (20%)
Similarity:154/416 - (37%) Gaps:130/416 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 AWANAADVWRLMCHRDEQDSRLRSISMLEQHPGLQPRMRAILLDWLIEVCEVYKLHRETFYLAVD 391
            |.:..|.:|::...:...:          |...:.|..|...:.||.:|....||:.||..||:.
Zfish    19 AVSREAKLWKVYVPKKPTN----------QDTDISPEKRDEAVRWLRDVHSQLKLYPETLCLAIG 73

  Fly   392 YLDRYLHVAHKVQKTHLQLIGITCLFVAAKV--EEIYPPKIGEFAYVTDGACTERDILNHEKILL 454
            .|||:|... |.:..:|:.|.|:|.|:|||.  |:...|.:.|.|..:...|:..:||..|:|:|
Zfish    74 ILDRFLSTI-KARPKYLRCIAISCFFLAAKTSEEDERIPSLRELASSSKCGCSPSEILRMERIVL 137

  Fly   455 QALDWDISPITITGWLGVYMQLNVNNRTPASFSQIGRQKSAEADDAFIYPQFSGFEFVQTSQLLD 519
            ..|:||:...|...:|.::..:.::.::       ||..:|          .||.          
Zfish   138 DKLNWDLHSATALDFLYIFHAMVLSCKS-------GRLSAA----------LSGL---------- 175

  Fly   520 LCTLDVGMANYSYSV-LAAAAISHTFSREMALRCSG-------LDWQVIQPCARWMEPFFRVISQ 576
                     |.|:.| |....:.|..:....|:..|       :..::.:.|..|:.....::.:
Zfish   176 ---------NPSHHVALLTQQLFHCLAHNALLQVRGSLLSLGLITLELEKLCPDWLALTVDLLHR 231

  Fly   577 KAPYLQLNEQNEQVSNKFGLGLICPNIVTDDSHIIQTHTTTM------------DMYDEVLMAQD 629
                ||::...          |||...:.  :..:.|||.::            :..||.::   
Zfish   232 ----LQIDSSQ----------LICCRELV--ARCLSTHTASLPPNTVYICRPLPEPRDEGVL--- 277

  Fly   630 AAHAMRARIQASPATALRAPESLLTPPASSH-----------KPDEY-------LGDEGDETGAR 676
                   .:..:|.    ||    :.|.|:|           :.|||       ..:|..:.|| 
Zfish   278 -------HVSLAPT----AP----SDPNSTHSRSAKRKVEQMEVDEYYDGIKRLYNEENPQEGA- 326

  Fly   677 SGISSTTTCCNTAASNKGGKSSSNNS 702
                   ..| ||.:..||:.::.:|
Zfish   327 -------LLC-TAQTAGGGQPNAGSS 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 39/130 (30%)
Cyclin_C <517..>571 CDD:281044 9/61 (15%)
ccniNP_998386.1 Cyclin_N 31..144 CDD:278560 37/123 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579802
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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