DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycE and CycD

DIOPT Version :9

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_523355.2 Gene:CycD / 32551 FlyBaseID:FBgn0010315 Length:477 Species:Drosophila melanogaster


Alignment Length:500 Identity:106/500 - (21%)
Similarity:185/500 - (37%) Gaps:151/500 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 KRQQRL--PALYGSEQGNLSSVASSVYTSPVVS-VDGQST------QELLSIRSSPAEDLSEAPH 189
            ||||::  ||:...:    ||:.||:..:...| .|.|:.      :||:.|.:| .:..::.|.
  Fly    22 KRQQQMSSPAIIRDQ----SSICSSLGDAESDSHPDAQNNAVVCNMKELVYIYAS-VDSAAKNPE 81

  Fly   190 --SPLPDSPDSPPSPDRGSKQTPVVVRYAAEQVVTSTVVTQKTEDDDLLDDSCEDYSYDEDDEDD 252
              .|.|..|..||.|...::......||.:::..||.  .|:.  |:.|..:.     |....|:
  Fly    82 QLEPPPPPPPPPPPPPTATQSIQSYPRYISQEPPTSH--CQRL--DERLTTTA-----DPPATDN 137

  Fly   253 VEEEDDDVEIYSSTISPASSGCSQQQAVNGERTPGLPKHQEQIHHPVSDLMINMRTPMSPAVENG 317
            |.....|..:||..       |.:          ...|.:|: ||.:.|...:::..::|.    
  Fly   138 VNTAIGDPTLYSDR-------CLE----------NFLKVEEK-HHKIPDTYFSIQKDITPP---- 180

  Fly   318 LRQCPLPALAWANAADVWRLMCHRDEQDSRLRSISMLEQHPGLQPRMRAILLDWLIEVCEVYKLH 382
                                                          ||.|:.:|::|||......
  Fly   181 ----------------------------------------------MRKIVAEWMMEVCAEENCQ 199

  Fly   383 RETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPP----KIGEFAYVTDGACTE 443
            .|...||::|:||:|. :..|:||.||::...||.:|:|:.|  |.    .:......||.:..:
  Fly   200 EEVVLLALNYMDRFLS-SKSVRKTQLQILAAACLLLASKLRE--PSCRALSVDLLVVYTDNSIYK 261

  Fly   444 RDILNHEKILLQALDWDISPITITGWLG-VYMQLNVNNRTPASFSQIGRQKSAEADDAFIYPQFS 507
            .|::..|..:|..|.||:|.:|...:|. :.|:|.:.::   :|..|...|......|||     
  Fly   262 DDLIKWELYVLSRLGWDLSSVTPLDFLELLMMRLPIGSK---NFPDINIGKVRGHAQAFI----- 318

  Fly   508 GFEFVQTSQLLDLCTLDVGMANYSYSVLAAAAISHTFSREMALRCSGLDWQV------------- 559
                       .|...:...|.:|.|.:||::|        |...:||.|.:             
  Fly   319 -----------SLAAKEHKFAKFSASTIAASSI--------AASMNGLKWHLRSGHNLHFLLSLM 364

  Fly   560 ----------IQPCARWMEPFFRVISQKAPYLQLNEQNEQVSNKF 594
                      ::.|...||..|:..|:......:|...:::|..:
  Fly   365 TDLTSVEQAQVRDCMLHMEDIFKEHSRNLEPFLVNIDPKEMSTLY 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 33/132 (25%)
Cyclin_C <517..>571 CDD:281044 14/76 (18%)
CycDNP_523355.2 Cyclin_N 155..280 CDD:278560 39/178 (22%)
Cyclin_C 282..>392 CDD:281044 26/136 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447486
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.