DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and Ccnb1

DIOPT Version :9

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_758505.2 Gene:Ccnb1 / 268697 MGIID:88302 Length:430 Species:Mus musculus


Alignment Length:441 Identity:106/441 - (24%)
Similarity:166/441 - (37%) Gaps:131/441 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 TAATSNGNKRKRRLSSDSNE-DPELGFEPPSAKRQQRLPALYGSEQGNLSSVASSVYTSPVVSVD 166
            |||:..|.:.:..|....|: ..||....|..:..:.|    |:.:|.:.::...|...||.   
Mouse    32 TAASKPGLRPRTALGDIGNKVSEELQARVPLKREAKTL----GTGKGTVKALPKPVEKVPVC--- 89

  Fly   167 GQSTQELLSIRSSP-AEDLSEAPHSPLPDSPDSP-PSPDRGSKQTPVVVRYAAEQVVTSTVVTQK 229
             :...||......| .|.:.|...||.|...|:| |||...|...| ...|..:......:....
Mouse    90 -EPEVELAEPEPEPELEHVREEKLSPEPILVDNPSPSPMETSGCAP-AEEYLCQAFSDVILAVSD 152

  Fly   230 TEDDDLLDDS-CEDYSYDEDDEDDVEEEDDDVEIYSSTISPASSGCSQQQAVNGERTPGLPKHQE 293
            .:.||..|.: |.:|..|               ||:.                            
Mouse   153 VDADDGADPNLCSEYVKD---------------IYAY---------------------------- 174

  Fly   294 QIHHPVSDLMINMRTPMSPAVENGLRQCPLPALAWANAADVWRLMCHRDEQDSRLRSISMLEQHP 358
                                    |||.                   .:||..|.:.:...|   
Mouse   175 ------------------------LRQL-------------------EEEQSVRPKYLQGRE--- 193

  Fly   359 GLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVE 423
             :...|||||:||||:|...::|.:||.|:.|..:||::..: .|.|..|||:|:|.:|:|:|.|
Mouse   194 -VTGNMRAILIDWLIQVQMKFRLLQETMYMTVSIIDRFMQNS-CVPKKMLQLVGVTAMFIASKYE 256

  Fly   424 EIYPPKIGEFAYVTDGACTERDILNHEKILLQALDWDISPITITGWLGVYMQLNVNNRTPASFSQ 488
            |:|||:||:||:||:...|:..|...|..:|:.|::.         ||..:.|:...|.    |:
Mouse   257 EMYPPEIGDFAFVTNNTYTKHQIRQMEMKILRVLNFS---------LGRPLPLHFLRRA----SK 308

  Fly   489 IGRQKSAEADDAFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAA 539
            :|     |.|..         :......|::|..||..|.:::.|.:||.|
Mouse   309 VG-----EVDVE---------QHTLAKYLMELSMLDYDMVHFAPSQIAAGA 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 47/128 (37%)
Cyclin_C <517..>571 CDD:281044 9/23 (39%)
Ccnb1NP_758505.2 Interaction with CDK2. /evidence=ECO:0000250 166..174 4/22 (18%)
Cyclin_N 170..295 CDD:278560 53/224 (24%)
Interaction with CDK2. /evidence=ECO:0000250 255..258 1/2 (50%)
Cyclin_C 297..415 CDD:281044 15/67 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836348
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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