DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and ccna2

DIOPT Version :10

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_694481.1 Gene:ccna2 / 192295 ZFINID:ZDB-GENE-020418-1 Length:428 Species:Danio rerio


Alignment Length:354 Identity:92/354 - (25%)
Similarity:157/354 - (44%) Gaps:70/354 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 PASSGCSQQQAVN--GERTPGLPKHQEQIHHPVSDLMINMRTPM-------SPAVEN----GLRQ 320
            |....|..::...  |||.........|||....|...:.:.|:       ||...|    .|||
Zfish    73 PQIIACKPEENARSFGERPSNRQPAAFQIHVDEPDGACSKKAPLQRSTMDCSPLTLNPTVTRLRQ 137

  Fly   321 ------CPLPALAWANAADVWRLMCHRDEQDSRLRSIS----------------------MLEQH 357
                  .||.| ::.:..|:..:.|  :|:.:.:..:|                      .:.:.
Zfish   138 PLATIDLPLEA-SFDSPMDMSVIDC--EERPTNVNEVSDYAAEIHTHLREMEVKSKPKAGYMRKQ 199

  Fly   358 PGLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKV 422
            |.:...|||||:|||:||.|.|||..||.||||:|:||:|. :..|.:..|||:|...:.:|:|.
Zfish   200 PDITNSMRAILVDWLVEVGEEYKLQNETLYLAVNYIDRFLS-SMSVLRGKLQLVGTAAMLLASKF 263

  Fly   423 EEIYPPKIGEFAYVTDGACTERDILNHEKILLQALDWDISPITITGWLGVY-MQLNVNNRTPASF 486
            ||||||::.||.|:||...|::.:|..|.::|..|.:|::..||..:|..| :...|:::..:..
Zfish   264 EEIYPPEVAEFVYITDDTYTKKQVLRMEHLVLTVLSFDLAAPTINQFLTQYFLHQPVSSKVESLS 328

  Fly   487 SQIGRQKSAEADDAFIY--PQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAAISHTFSREMA 549
            ..:|.....:.|....|  .|.:...|:              :||::.:       |.::|:.: 
Zfish   329 MFLGELSLIDCDPFLKYLPSQMAAAAFI--------------LANHTLA-------SGSWSKSL- 371

  Fly   550 LRCSGLDWQVIQPCARWMEPFFRVISQKA 578
            :..:|...:.:.||.:.:...:...||.|
Zfish   372 VDLTGYSLEDLLPCVQDLHQTYLAASQHA 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 CYCLIN_CCNE_rpt1 327..459 CDD:410223 52/153 (34%)
CYCLIN_CCNE_rpt2 463..576 CDD:410224 17/115 (15%)
ccna2NP_694481.1 Cyclin_N2 97..157 CDD:465146 15/60 (25%)
CYCLIN_CCNA2_rpt1 171..301 CDD:410264 49/130 (38%)
CYCLIN_CCNA2_rpt2 305..414 CDD:410267 20/118 (17%)

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