Protein Alignment CycE and cya-1

DIOPT Version :9

• Sequence 1: NP_001246037.1
• Gene: CycE / 34924
• FlyBaseID: FBgn0010382
• Length: 712
• Species: Drosophila melanogaster
• Sequence 2: NP_499018.1
• Gene: cya-1 / 176287
• WormBaseID: WBGene00000863
• Length: 485
• Species: Caenorhabditis elegans
• Alignment Length: 583
• Identity: 125/583 - (21%)
• Similarity: 213/583 - (36%)
• Gaps: 128/583 - (21%)

  Fly   100 AASTAATSNGNKRKRRLSSDSN--EDPELGFE-----PPSAKRQQRLPALYGSEQGNLSSVASSV 157
            :|.:...||||..|.:..::.|  ::..||.:     ..|...||.||             :..:
 Worm     3 SALSLKPSNGNAAKSQAVNNKNVIKNAPLGGKLTRQIGTSNLLQQALP-------------SKKI 54

  Fly   158 YTSPVVSVDGQSTQELLSIRSSPAEDLSEAPHSPLPDSPDSPPSPDRG---SKQTPVVVRYAAEQ 219
            ..||::.:|.:.:.::...:....|:.||...:...|| :..|:.|..   ..:..:..:..||:
 Worm    55 DESPIIKIDAKDSFKVFEDQEPEKENSSENVDATEKDS-NVIPAEDNNMIHELERKMEEKSRAEK 118

  Fly   220 VVTSTVVTQKTED-DDLLDDSCEDYSYDEDDEDDVEEEDDDVEIYSSTISPASSGC-------SQ 276
            :....:.|:...| .....:...::|...||:|     .|.|.:.|||.:.:....       ..
 Worm   119 LKFKFMQTRDNSDITSRFSEPPSEFSVLCDDDD-----CDKVSVASSTFTTSVRATFSSFHFDEN 178

  Fly   277 QQAVNGERTPGLPKHQEQIHHPVSDLMINMRTPMSPAVENGLRQCPLPALAWANAADVWRLMCHR 341
            |:.....:...:.|.|::......|..:.......|                    |:.:.|.||
 Worm   179 QRKKEFGKEEAVKKIQKKAAKEARDDSMFSSEEFFP--------------------DIIKYMLHR 223

  Fly   342 DEQDSRLRSISMLEQHPGLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKT 406
              |.....|....:....:...||.||:||..:|.:.|...:|||:|||..:||.|.: ..:.|.
 Worm   224 --QTKNRASHECFDIQSQVNEEMRTILIDWFSDVVKEYNFQKETFHLAVSLVDRALSM-FNIDKM 285

  Fly   407 HLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDILNHEKILLQALDWDISPITITGWLG 471
            ..||:|.|.:.:|.|.|||:||:|.:||.:||......|||..|:.||...|:.::..| :.|.|
 Worm   286 RFQLVGTTSMMIAVKYEEIFPPEIEDFALITDNTYRVPDILLMERFLLGKFDFVVAMPT-SSWFG 349

  Fly   472 VYMQLNVNNRTPASFSQIGRQKSAEADDAFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLA 536
            ......:|      |::..|.                    ....||:|..:||....|..|.:|
 Worm   350 TCFAKRMN------FTKKMRN--------------------TVHYLLELSLIDVHFLRYRPSDIA 388

  Fly   537 AAAISHTFSREMALRCSGLDW--QVIQPCARWMEPFFRVISQKAPYLQLNEQNEQVSNKFGLGLI 599
            |||.  .|:.   |:.....|  :::.......|.|..|:.
 Worm   389 AAAC--CFAN---LQADVESWPQKMVDDTGISTEDFVDVLR------------------------ 424

  Fly   600 CPNIVTDDSHIIQTHTTTMDMYDEVLMAQDAAHAMRARIQASPATALRA--PESLLTPPASSH 660
                   |.|.:..:.:|.| :..:.........|...:..:|...||:  |...:|.|.||:
 Worm   425 -------DLHRMYLNASTAD-FKSIFYNYSETAQMEVALLPAPTDKLRSMFPSIFVTAPKSSN 479

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CycE	NP_001246037.1	Cyclin_N	333..462	CDD:278560	47/128 (37%)
		Cyclin_C	<517..>571	CDD:281044	15/55 (27%)
cya-1	NP_499018.1	Cyclin_N	215..338	CDD:278560	46/125 (37%)
		Cyclin_C	343..459	CDD:281044	28/179 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5024
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D993640at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820