DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CycE and T12C9.7

DIOPT Version :9

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_001122636.1 Gene:T12C9.7 / 173782 WormBaseID:WBGene00020461 Length:400 Species:Caenorhabditis elegans


Alignment Length:399 Identity:77/399 - (19%)
Similarity:123/399 - (30%) Gaps:120/399 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 QSTQELLSIRSSPA-EDLSEAPHS-----PLPDSPDSPPSPDRGSKQTPVVVRYAAE------QV 220
            |||:.:||...||: .|......|     ...::||......: .:|.|.:.....|      :|
 Worm    13 QSTETVLSNSQSPSFVDFKRITRSKKYSAAQKNAPDEKKQCTK-KRQLPSLAPACEELQPKKSKV 76

  Fly   221 VTSTVVTQKTEDDDLLDDSCEDYSYDEDDEDDVEEEDDDV-EIYSSTISPASSGCSQQQAVNGER 284
            ...||.:|||.....|||.|.:....|.....:.:.:.|: |:|.:.       |.....:....
 Worm    77 TEETVASQKTHGLSNLDDYCLEMPDFEKQMLSIWQSNIDITEMYRAL-------CKSASLIPAPH 134

  Fly   285 TPGLPKHQEQIHHPVSDLMINMRTPMSPAVENGLRQ-CPLPALAWANAADVWRLMCHRDEQDSRL 348
            |                |......|.||   |..:| ||                          
 Worm   135 T----------------LFCVYEIPESP---NKTQQFCP-------------------------- 154

  Fly   349 RSISMLEQHPGLQPRMRAILLDWLIEVCEVY------KLHRETFYLAVDYLDRYLHVAHKVQKTH 407
                     ..::.|.|.:|        .::      |:..|..:|....||:.|.:. .|.|..
 Worm   155 ---------SSIEDRQRVLL--------NIFSRRFQLKVSSEALHLGAALLDKCLDMM-SVNKAS 201

  Fly   408 LQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDILNHEKILLQALDW-DISPITITGWLG 471
            |..:....|.:|:|:|::             ...|..:|:..|.|...|... .:....:|.   
 Worm   202 LDELAAVTLVIASKLEDV-------------NCLTIENIIGVELIEKSAAQMAALERFVLTS--- 250

  Fly   472 VYMQLNVNNRTPASFSQIGRQKSAEADDAFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLA 536
              :...:...||..||..          ..:|...|..:...|..||:|..|.|....:...|:|
 Worm   251 --LSFKITIPTPLHFSTY----------MLVYLSASPAKIHLTYYLLELSILYVHNRRFPSDVVA 303

  Fly   537 AAAISHTFS 545
            .||....|:
 Worm   304 NAATCLAFA 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 21/135 (16%)
Cyclin_C <517..>571 CDD:281044 10/29 (34%)
T12C9.7NP_001122636.1 COG5024 <171..322 CDD:227357 36/171 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.