DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and ccng1

DIOPT Version :10

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_955775.1 Gene:ccng1 / 171473 ZFINID:ZDB-GENE-020322-1 Length:299 Species:Danio rerio


Alignment Length:143 Identity:44/143 - (30%)
Similarity:66/143 - (46%) Gaps:27/143 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   352 SMLEQHPGLQP----------------RMRAILLDWLIEVCEVYKLHR------ETFYLAVDYLD 394
            |:|:|....||                ||...|.|:  :|.|:..|.|      |||..||:.||
Zfish    19 SLLDQESRYQPKLCGLRVIESAQDNGLRMTVKLRDY--QVRELLSLTRFFGFCAETFSFAVNLLD 81

  Fly   395 RYLHVAHKVQKTHLQLIGITCLFVAAKV--EEIYPPKIGEFAYVTDGACTERDILNHEKILLQAL 457
            |:|.|. |:|..||..:|:.|.::|.|.  ||...|...:...::....|..|::..|||:|:.|
Zfish    82 RFLAVM-KIQPKHLSCVGLCCFYIAVKTSEEEKNVPLASDLIRISQNRFTVHDMMRMEKIILEKL 145

  Fly   458 DWDISPITITGWL 470
            :|.:...|...:|
Zfish   146 NWKVKAPTALHFL 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 CYCLIN_CCNE_rpt1 327..459 CDD:410223 41/130 (32%)
CYCLIN_CCNE_rpt2 463..576 CDD:410224 2/8 (25%)
ccng1NP_955775.1 CYCLIN_CCNG1 51..148 CDD:410286 34/99 (34%)

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