DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and Ccnb2

DIOPT Version :9

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_031656.2 Gene:Ccnb2 / 12442 MGIID:88311 Length:398 Species:Mus musculus


Alignment Length:448 Identity:102/448 - (22%)
Similarity:163/448 - (36%) Gaps:160/448 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 RKRRLSSD-SNEDPELGFEPPSAKRQQRLPALYGSEQGN-----LSSVASSVYTSPVVSVDGQST 170
            |:..:||| .|.|.|:   .|.||....:......|.||     .:.||.....:.|.::..:.|
Mouse     5 RRPTVSSDLKNIDTEV---IPKAKSHVTIRRAVLEEIGNKVRNRTTQVAKKPQNTKVPALPTKVT 66

  Fly   171 QELLSIRSSPAEDLSEAPHSPLPDSP-DSPPSPDRGSKQTPVVVRYAAEQVVTSTVVTQKTEDDD 234
                ::...|....|..|......:| |.||:|                            ||..
Mouse    67 ----NVNKQPKPTASVKPVQMEALAPKDRPPAP----------------------------EDVS 99

  Fly   235 LLDDS-CEDYSYDEDDE-----DDVEEEDDDVEIYSSTISPASSGCSQQQAVNGERTPGLPKHQE 293
            :.::| |:.:|    |.     :|::.||.                                   
Mouse   100 MKEESLCQAFS----DALLCKIEDIDNEDR----------------------------------- 125

  Fly   294 QIHHPVSDLMINMRTPMSPAVENGLRQCPLPALAWANAADVWRLMCHRDEQDSRLRSISMLEQ-H 357
                                 ||       |.|......|:::.          ||.:.:|:. :
Mouse   126 ---------------------EN-------PQLCSDYVKDIYQY----------LRQLEVLQSIN 152

  Fly   358 P------GLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCL 416
            |      .:..||||||:|||::|...::|.:||.|:.:..:||:|. |..|.:..|||:|||.|
Mouse   153 PHFLDGRDINGRMRAILVDWLVQVHSKFRLLQETLYMCIAIMDRFLQ-AQLVCRKKLQLVGITAL 216

  Fly   417 FVAAKVEEIYPPKIGEFAYVTDGACTERDILNHEKILLQALDWDISPITITGWLGVYMQLNVNNR 481
            .:|:|.||::.|.|.:|.|:||.|.|...|...|.::|:.|.::         ||..:.|:...|
Mouse   217 LLASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFE---------LGRPLPLHFLRR 272

  Fly   482 TPASFSQIGRQKSAEADDAFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAA 539
            .         .|:.|.|..         :......|::|..:|..|.:|..|.:||||
Mouse   273 A---------SKAGEVDVE---------QHTLAKYLMELTLVDYDMVHYHPSQVAAAA 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 Cyclin_N 333..462 CDD:278560 47/135 (35%)
Cyclin_C <517..>571 CDD:281044 10/23 (43%)
Ccnb2NP_031656.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 65..97 9/63 (14%)
Cyclin_N 137..262 CDD:278560 47/144 (33%)
Cyclin_C 264..382 CDD:281044 15/67 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D993640at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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