DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and ccnd2

DIOPT Version :10

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:XP_002940348.2 Gene:ccnd2 / 100038071 XenbaseID:XB-GENE-481219 Length:290 Species:Xenopus tropicalis


Alignment Length:182 Identity:52/182 - (28%)
Similarity:89/182 - (48%) Gaps:26/182 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 LQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEE 424
            :||.||.::..|::||||..:...|.|.||::||||:|.|. ..:|.||||:|..|:|:|:|::|
 Frog    51 IQPFMRRMVATWMLEVCEEQRCEEEVFPLAMNYLDRFLAVI-PTRKCHLQLLGAVCMFLASKLKE 114

  Fly   425 IYPPKIGEFAYVTDGACTERDILNHEKILLQALDWDISPITITGWLGVYMQLNVNNRTPASF-SQ 488
            ..|....:....||.:...:::|..|.::|..|.|:::.:                 ||..| ..
 Frog   115 TIPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN
LAAV-----------------TPHDFIEH 162

  Fly   489 IGRQKSAEADDAFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAAI 540
            |.|:.....:...:..:.:     ||  .:.||..|...|.|..|::|..::
 Frog   163 ILRKLPLPKEKLLLIRKHA-----QT--FIALCATDFNFAMYPPSMIATGSV 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 CYCLIN_CCNE_rpt1 327..459 CDD:410223 37/98 (38%)
CYCLIN_CCNE_rpt2 463..576 CDD:410224 14/79 (18%)
ccnd2XP_002940348.2 CYCLIN_CCND2_rpt1 1..150 CDD:410277 37/99 (37%)
CYCLIN_CCND2_rpt2 155..259 CDD:410280 14/60 (23%)

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