DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18478 and zgc:153968

DIOPT Version :9

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001070924.1 Gene:zgc:153968 / 768292 ZFINID:ZDB-GENE-061027-211 Length:301 Species:Danio rerio


Alignment Length:293 Identity:81/293 - (27%)
Similarity:130/293 - (44%) Gaps:38/293 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LIVALFVLGV-AENVE-NLQQIEELKCGYGNPDAVKVQFNVTEGQ-AKPAEFPWTIAV--IHNRS 66
            |.:|:.|.|| ..|:. :|.|::  .||     ...::..:..|| |....:||.:::  |....
Zfish     3 LRLAVCVAGVLLLNISGSLCQLD--VCG-----RAPLKPRIIGGQTAMAGSWPWQVSIHYIPTGG 60

  Fly    67 LVGGGSLITPDIVLTAAHRIFNKDVEDIVVSAGEWEYGSALEKYPFEEAFVL-----KMVIHKSF 126
            |:.||:||..:.||:||.........::||..|....|         :..|:     :::.|..:
Zfish    61 LLCGGTLINREWVLSAAQCFQKLTASNLVVHLGHLSTG---------DPNVIHNPASQIINHPKY 116

  Fly   127 NYQRGANNLALLFLDREFPLTYKINTICLPTQKRSLSSTRCI-VAGWGKYQFSDTHYGGVLKKID 190
            :.....|::|||.|......|..|..:||.....||...... :.|||......|.:...|:::.
Zfish   117 DSATNKNDIALLKLSTPVSFTDYIKPVCLTASGSSLGKGAVSWITGWGSINTGGTQFPTTLQEVK 181

  Fly   191 LPIVPRHICQDQLRKTRLGQNYTLPRGLICAG-GEKDNDACTGDGGGALFCPMTEDPKQFEQIGI 254
            :|:|....|     |:..|...|  .|:|||| .|.....|.|||||.|   :....:|:.|.||
Zfish   182 IPVVSNGDC-----KSAYGSLIT--DGMICAGPNEGGKGICMGDGGGPL---VHNSSEQWIQSGI 236

  Fly   255 VNWGVGCKEKNVPATYTDVFEFKPWIVQQIKEN 287
            .::|.||.:...|..:|.|.|::.||..||.::
Zfish   237 ASFGRGCAQPKNPGVFTRVSEYESWIKSQISKD 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..283 CDD:238113 67/241 (28%)
Tryp_SPc 50..280 CDD:214473 65/238 (27%)
zgc:153968NP_001070924.1 Tryp_SPc 35..262 CDD:214473 67/245 (27%)
Tryp_SPc 36..265 CDD:238113 69/247 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587470
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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